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A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India
Only a few Impatiens spp. from South India (one of the five centers of diversity for Impatiens species) were included in the published datum of molecular phylogeny of the family Balsaminaceae. The present investigation is a novel attempt to reveal the phylogenetic association of Impatiens species of...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135705/ https://www.ncbi.nlm.nih.gov/pubmed/28330330 http://dx.doi.org/10.1007/s13205-016-0574-8 |
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author | Shajitha, P. P. Dhanesh, N. R. Ebin, P. J. Laly, Joseph Aneesha, Devassy Reshma, John Augustine, Jomy Linu, Mathew |
author_facet | Shajitha, P. P. Dhanesh, N. R. Ebin, P. J. Laly, Joseph Aneesha, Devassy Reshma, John Augustine, Jomy Linu, Mathew |
author_sort | Shajitha, P. P. |
collection | PubMed |
description | Only a few Impatiens spp. from South India (one of the five centers of diversity for Impatiens species) were included in the published datum of molecular phylogeny of the family Balsaminaceae. The present investigation is a novel attempt to reveal the phylogenetic association of Impatiens species of South India, by placing them in the global phylogeny of Impatiens based on a combined analysis of two chloroplast genes. Thirty species of genus Impatiens were collected from different locations of South India. Total genomic DNA was extracted from fresh plant leaf, and polymerase chain reaction was carried out using atpB–rbcL and trnL-F intergenic spacer-specific forward and reverse primers. Thirteen sequences of Impatiens species from three centers of diversity were obtained from GenBank for reconstructing the evolutionary relationships within the genus Impatiens. Bayesian inference analysis was carried out in MrBayes v.3.2.2. This analysis supported Southeast Asia as the ancestral place of origin of extant Impatiens species. Molecular phylogeny of South Indian Impatiens spp. based on combined chloroplast sequences showed the same association as that of morphological taxonomy. Sections Scapigerae, Tomentosae, Sub-Umbellatae, and Racemosae showed Southeast Asian relationship, while sections Annuae and Microsepalae showed African affinity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s13205-016-0574-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5135705 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-51357052016-12-19 A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India Shajitha, P. P. Dhanesh, N. R. Ebin, P. J. Laly, Joseph Aneesha, Devassy Reshma, John Augustine, Jomy Linu, Mathew 3 Biotech Short Reports Only a few Impatiens spp. from South India (one of the five centers of diversity for Impatiens species) were included in the published datum of molecular phylogeny of the family Balsaminaceae. The present investigation is a novel attempt to reveal the phylogenetic association of Impatiens species of South India, by placing them in the global phylogeny of Impatiens based on a combined analysis of two chloroplast genes. Thirty species of genus Impatiens were collected from different locations of South India. Total genomic DNA was extracted from fresh plant leaf, and polymerase chain reaction was carried out using atpB–rbcL and trnL-F intergenic spacer-specific forward and reverse primers. Thirteen sequences of Impatiens species from three centers of diversity were obtained from GenBank for reconstructing the evolutionary relationships within the genus Impatiens. Bayesian inference analysis was carried out in MrBayes v.3.2.2. This analysis supported Southeast Asia as the ancestral place of origin of extant Impatiens species. Molecular phylogeny of South Indian Impatiens spp. based on combined chloroplast sequences showed the same association as that of morphological taxonomy. Sections Scapigerae, Tomentosae, Sub-Umbellatae, and Racemosae showed Southeast Asian relationship, while sections Annuae and Microsepalae showed African affinity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s13205-016-0574-8) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2016-12-02 2016-12 /pmc/articles/PMC5135705/ /pubmed/28330330 http://dx.doi.org/10.1007/s13205-016-0574-8 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Short Reports Shajitha, P. P. Dhanesh, N. R. Ebin, P. J. Laly, Joseph Aneesha, Devassy Reshma, John Augustine, Jomy Linu, Mathew A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title | A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title_full | A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title_fullStr | A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title_full_unstemmed | A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title_short | A combined chloroplast atpB–rbcL and trnL-F phylogeny unveils the ancestry of balsams (Impatiens spp.) in the Western Ghats of India |
title_sort | combined chloroplast atpb–rbcl and trnl-f phylogeny unveils the ancestry of balsams (impatiens spp.) in the western ghats of india |
topic | Short Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135705/ https://www.ncbi.nlm.nih.gov/pubmed/28330330 http://dx.doi.org/10.1007/s13205-016-0574-8 |
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