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Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA

Macroscopic unique self-assembled structures are produced via double-stranded DNA formation (hybridization) as a specific binding essential in biological systems. However, a large amount of complementary DNA molecules are usually required to form an optically observable structure via natural hybridi...

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Autores principales: Iida, Takuya, Nishimura, Yushi, Tamura, Mamoru, Nishida, Keisuke, Ito, Syoji, Tokonami, Shiho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137144/
https://www.ncbi.nlm.nih.gov/pubmed/27917861
http://dx.doi.org/10.1038/srep37768
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author Iida, Takuya
Nishimura, Yushi
Tamura, Mamoru
Nishida, Keisuke
Ito, Syoji
Tokonami, Shiho
author_facet Iida, Takuya
Nishimura, Yushi
Tamura, Mamoru
Nishida, Keisuke
Ito, Syoji
Tokonami, Shiho
author_sort Iida, Takuya
collection PubMed
description Macroscopic unique self-assembled structures are produced via double-stranded DNA formation (hybridization) as a specific binding essential in biological systems. However, a large amount of complementary DNA molecules are usually required to form an optically observable structure via natural hybridization, and the detection of small amounts of DNA less than femtomole requires complex and time-consuming procedures. Here, we demonstrate the laser-induced acceleration of hybridization between zeptomole-level DNA and DNA-modified nanoparticles (NPs), resulting in the assembly of a submillimetre network-like structure at the desired position with a dramatic spectral modulation within several minutes. The gradual enhancement of light-induced force and convection facilitated the two-dimensional network growth near the air-liquid interface with optical and fluidic symmetry breakdown. The simultaneous microscope observation and local spectroscopy revealed that the assembling process and spectral change are sensitive to the DNA sequence. Our findings establish innovative guiding principles for facile bottom-up production via various biomolecular recognition events.
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spelling pubmed-51371442017-01-27 Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA Iida, Takuya Nishimura, Yushi Tamura, Mamoru Nishida, Keisuke Ito, Syoji Tokonami, Shiho Sci Rep Article Macroscopic unique self-assembled structures are produced via double-stranded DNA formation (hybridization) as a specific binding essential in biological systems. However, a large amount of complementary DNA molecules are usually required to form an optically observable structure via natural hybridization, and the detection of small amounts of DNA less than femtomole requires complex and time-consuming procedures. Here, we demonstrate the laser-induced acceleration of hybridization between zeptomole-level DNA and DNA-modified nanoparticles (NPs), resulting in the assembly of a submillimetre network-like structure at the desired position with a dramatic spectral modulation within several minutes. The gradual enhancement of light-induced force and convection facilitated the two-dimensional network growth near the air-liquid interface with optical and fluidic symmetry breakdown. The simultaneous microscope observation and local spectroscopy revealed that the assembling process and spectral change are sensitive to the DNA sequence. Our findings establish innovative guiding principles for facile bottom-up production via various biomolecular recognition events. Nature Publishing Group 2016-12-05 /pmc/articles/PMC5137144/ /pubmed/27917861 http://dx.doi.org/10.1038/srep37768 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Iida, Takuya
Nishimura, Yushi
Tamura, Mamoru
Nishida, Keisuke
Ito, Syoji
Tokonami, Shiho
Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title_full Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title_fullStr Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title_full_unstemmed Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title_short Submillimetre Network Formation by Light-induced Hybridization of Zeptomole-level DNA
title_sort submillimetre network formation by light-induced hybridization of zeptomole-level dna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137144/
https://www.ncbi.nlm.nih.gov/pubmed/27917861
http://dx.doi.org/10.1038/srep37768
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