Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka

Here we report the draft genome sequence and annotation of A. veronii strain Ae52 isolated from the kidney of a morbund, septicaemic gold fish (Carassius auratus) in Sri Lanka. This clinical isolate showed resistance to multiple antimicrobials; amoxicillin, neomycin, trimethoprim-sulphonamide, chlor...

Descripción completa

Detalles Bibliográficos
Autores principales: De S. Jagoda, S.S.S., Honein, Karim, Arulkanthan, Appudurai, Ushio, Hideki, Asakawa, Shuichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137324/
https://www.ncbi.nlm.nih.gov/pubmed/27942459
http://dx.doi.org/10.1016/j.gdata.2016.11.011
_version_ 1782471896293441536
author De S. Jagoda, S.S.S.
Honein, Karim
Arulkanthan, Appudurai
Ushio, Hideki
Asakawa, Shuichi
author_facet De S. Jagoda, S.S.S.
Honein, Karim
Arulkanthan, Appudurai
Ushio, Hideki
Asakawa, Shuichi
author_sort De S. Jagoda, S.S.S.
collection PubMed
description Here we report the draft genome sequence and annotation of A. veronii strain Ae52 isolated from the kidney of a morbund, septicaemic gold fish (Carassius auratus) in Sri Lanka. This clinical isolate showed resistance to multiple antimicrobials; amoxicillin, neomycin, trimethoprim-sulphonamide, chloramphenicol, tetracycline, enrofloxacin, erythromycin and nitrofurantoin. The size of the draft genome is 4.56 Mbp with 58.66% of G + C content consisting 4328 coding sequences. It harbors a repertoire of putative antibiotic resistant determinants that explains the genetic basis of its resistance to various classes of antibiotics. The genome sequence has been deposited in DDBJ/EMBL/GenBank under the accession numbers BDGY01000001-BDGY01000080.
format Online
Article
Text
id pubmed-5137324
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-51373242016-12-09 Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka De S. Jagoda, S.S.S. Honein, Karim Arulkanthan, Appudurai Ushio, Hideki Asakawa, Shuichi Genom Data Data in Brief Here we report the draft genome sequence and annotation of A. veronii strain Ae52 isolated from the kidney of a morbund, septicaemic gold fish (Carassius auratus) in Sri Lanka. This clinical isolate showed resistance to multiple antimicrobials; amoxicillin, neomycin, trimethoprim-sulphonamide, chloramphenicol, tetracycline, enrofloxacin, erythromycin and nitrofurantoin. The size of the draft genome is 4.56 Mbp with 58.66% of G + C content consisting 4328 coding sequences. It harbors a repertoire of putative antibiotic resistant determinants that explains the genetic basis of its resistance to various classes of antibiotics. The genome sequence has been deposited in DDBJ/EMBL/GenBank under the accession numbers BDGY01000001-BDGY01000080. Elsevier 2016-11-10 /pmc/articles/PMC5137324/ /pubmed/27942459 http://dx.doi.org/10.1016/j.gdata.2016.11.011 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
De S. Jagoda, S.S.S.
Honein, Karim
Arulkanthan, Appudurai
Ushio, Hideki
Asakawa, Shuichi
Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title_full Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title_fullStr Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title_full_unstemmed Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title_short Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka
title_sort genome sequencing and annotation of aeromonas veronii strain ae52, a multidrug-resistant isolate from septicaemic gold fish (carassius auratus) in sri lanka
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137324/
https://www.ncbi.nlm.nih.gov/pubmed/27942459
http://dx.doi.org/10.1016/j.gdata.2016.11.011
work_keys_str_mv AT desjagodasss genomesequencingandannotationofaeromonasveroniistrainae52amultidrugresistantisolatefromsepticaemicgoldfishcarassiusauratusinsrilanka
AT honeinkarim genomesequencingandannotationofaeromonasveroniistrainae52amultidrugresistantisolatefromsepticaemicgoldfishcarassiusauratusinsrilanka
AT arulkanthanappudurai genomesequencingandannotationofaeromonasveroniistrainae52amultidrugresistantisolatefromsepticaemicgoldfishcarassiusauratusinsrilanka
AT ushiohideki genomesequencingandannotationofaeromonasveroniistrainae52amultidrugresistantisolatefromsepticaemicgoldfishcarassiusauratusinsrilanka
AT asakawashuichi genomesequencingandannotationofaeromonasveroniistrainae52amultidrugresistantisolatefromsepticaemicgoldfishcarassiusauratusinsrilanka

Ejemplares similares