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A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis
CONTEXT: Text-based reporting and manual arbitration for whole slide imaging (WSI) validation studies are labor intensive and do not allow for consistent, scalable, and repeatable data collection or analysis. OBJECTIVE: The objective of this study was to establish a method of data capture and analys...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Medknow Publications & Media Pvt Ltd
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139454/ https://www.ncbi.nlm.nih.gov/pubmed/27994941 http://dx.doi.org/10.4103/2153-3539.194841 |
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author | Wack, Katy Drogowski, Laura Treloar, Murray Evans, Andrew Ho, Jonhan Parwani, Anil Montalto, Michael C. |
author_facet | Wack, Katy Drogowski, Laura Treloar, Murray Evans, Andrew Ho, Jonhan Parwani, Anil Montalto, Michael C. |
author_sort | Wack, Katy |
collection | PubMed |
description | CONTEXT: Text-based reporting and manual arbitration for whole slide imaging (WSI) validation studies are labor intensive and do not allow for consistent, scalable, and repeatable data collection or analysis. OBJECTIVE: The objective of this study was to establish a method of data capture and analysis using standardized codified checklists and predetermined synoptic discordance tables and to use these methods in a pilot multisite validation study. METHODS AND STUDY DESIGN: Fifteen case report form checklists were generated from the College of American Pathology cancer protocols. Prior to data collection, all hypothetical pairwise comparisons were generated, and a level of harm was determined for each possible discordance. Four sites with four pathologists each generated 264 independent reads of 33 cases. Preestablished discordance tables were applied to determine site by site and pooled accuracy, intrareader/intramodality, and interreader intramodality error rates. RESULTS: Over 10,000 hypothetical pairwise comparisons were evaluated and assigned harm in discordance tables. The average difference in error rates between WSI and glass, as compared to ground truth, was 0.75% with a lower bound of 3.23% (95% confidence interval). Major discordances occurred on challenging cases, regardless of modality. The average inter-reader agreement across sites for glass was 76.5% (weighted kappa of 0.68) and for digital it was 79.1% (weighted kappa of 0.72). CONCLUSION: These results demonstrate the feasibility and utility of employing standardized synoptic checklists and predetermined discordance tables to gather consistent, comprehensive diagnostic data for WSI validation studies. This method of data capture and analysis can be applied in large-scale multisite WSI validations. |
format | Online Article Text |
id | pubmed-5139454 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Medknow Publications & Media Pvt Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-51394542016-12-19 A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis Wack, Katy Drogowski, Laura Treloar, Murray Evans, Andrew Ho, Jonhan Parwani, Anil Montalto, Michael C. J Pathol Inform Original Article CONTEXT: Text-based reporting and manual arbitration for whole slide imaging (WSI) validation studies are labor intensive and do not allow for consistent, scalable, and repeatable data collection or analysis. OBJECTIVE: The objective of this study was to establish a method of data capture and analysis using standardized codified checklists and predetermined synoptic discordance tables and to use these methods in a pilot multisite validation study. METHODS AND STUDY DESIGN: Fifteen case report form checklists were generated from the College of American Pathology cancer protocols. Prior to data collection, all hypothetical pairwise comparisons were generated, and a level of harm was determined for each possible discordance. Four sites with four pathologists each generated 264 independent reads of 33 cases. Preestablished discordance tables were applied to determine site by site and pooled accuracy, intrareader/intramodality, and interreader intramodality error rates. RESULTS: Over 10,000 hypothetical pairwise comparisons were evaluated and assigned harm in discordance tables. The average difference in error rates between WSI and glass, as compared to ground truth, was 0.75% with a lower bound of 3.23% (95% confidence interval). Major discordances occurred on challenging cases, regardless of modality. The average inter-reader agreement across sites for glass was 76.5% (weighted kappa of 0.68) and for digital it was 79.1% (weighted kappa of 0.72). CONCLUSION: These results demonstrate the feasibility and utility of employing standardized synoptic checklists and predetermined discordance tables to gather consistent, comprehensive diagnostic data for WSI validation studies. This method of data capture and analysis can be applied in large-scale multisite WSI validations. Medknow Publications & Media Pvt Ltd 2016-11-29 /pmc/articles/PMC5139454/ /pubmed/27994941 http://dx.doi.org/10.4103/2153-3539.194841 Text en Copyright: © 2016 Journal of Pathology Informatics http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as the author is credited and the new creations are licensed under the identical terms. |
spellingShingle | Original Article Wack, Katy Drogowski, Laura Treloar, Murray Evans, Andrew Ho, Jonhan Parwani, Anil Montalto, Michael C. A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title | A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title_full | A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title_fullStr | A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title_full_unstemmed | A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title_short | A multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
title_sort | multisite validation of whole slide imaging for primary diagnosis using standardized data collection and analysis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139454/ https://www.ncbi.nlm.nih.gov/pubmed/27994941 http://dx.doi.org/10.4103/2153-3539.194841 |
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