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A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and co...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elmer Press
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139762/ https://www.ncbi.nlm.nih.gov/pubmed/27942286 http://dx.doi.org/10.4021/gr2010.06.214w |
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author | Ochs-Balcom, Heather M. L.Thompson, Cheryl Plummer, Sarah Luo, Guangbin Tucker, Thomas C. Casey, Graham Li, Li |
author_facet | Ochs-Balcom, Heather M. L.Thompson, Cheryl Plummer, Sarah Luo, Guangbin Tucker, Thomas C. Casey, Graham Li, Li |
author_sort | Ochs-Balcom, Heather M. |
collection | PubMed |
description | BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and colon cancer in a population-based study of 390 colon cancer cases and 464 population controls. RESULTS: While both crude and covariate-adjusted single SNP analyses were only suggestive for an association with borderline significance (p = 0.07), haplotype analysis shows that individuals carrying the T-G haplotype (rs820196 common allele and rs4789223 minor allele) were at significantly increased risk for colon cancer (OR = 1.34, 95% CI = 1.02-1.76, p = 0.05). Adjustment for age, sex, body mass index, non-steroidal anti-inflammatory use and family history of colon cancer did not alter the results. CONCLUSIONS: These results suggest that a haplotype harboring the minor allele of rs4789223 is associated with colon cancer risk. Further study of RECQL5 as a colon cancer susceptibility gene is warranted, particularly with respect to variants in linkage disequilibrium with rs4789223. |
format | Online Article Text |
id | pubmed-5139762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Elmer Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-51397622016-12-09 A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer Ochs-Balcom, Heather M. L.Thompson, Cheryl Plummer, Sarah Luo, Guangbin Tucker, Thomas C. Casey, Graham Li, Li Gastroenterology Res Original Article BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and colon cancer in a population-based study of 390 colon cancer cases and 464 population controls. RESULTS: While both crude and covariate-adjusted single SNP analyses were only suggestive for an association with borderline significance (p = 0.07), haplotype analysis shows that individuals carrying the T-G haplotype (rs820196 common allele and rs4789223 minor allele) were at significantly increased risk for colon cancer (OR = 1.34, 95% CI = 1.02-1.76, p = 0.05). Adjustment for age, sex, body mass index, non-steroidal anti-inflammatory use and family history of colon cancer did not alter the results. CONCLUSIONS: These results suggest that a haplotype harboring the minor allele of rs4789223 is associated with colon cancer risk. Further study of RECQL5 as a colon cancer susceptibility gene is warranted, particularly with respect to variants in linkage disequilibrium with rs4789223. Elmer Press 2010-06 2010-05-20 /pmc/articles/PMC5139762/ /pubmed/27942286 http://dx.doi.org/10.4021/gr2010.06.214w Text en Copyright 2010, Ochs-Balcom et al. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Ochs-Balcom, Heather M. L.Thompson, Cheryl Plummer, Sarah Luo, Guangbin Tucker, Thomas C. Casey, Graham Li, Li A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title | A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title_full | A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title_fullStr | A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title_full_unstemmed | A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title_short | A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer |
title_sort | recq protein-like 5 haplotype is associated with colon cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139762/ https://www.ncbi.nlm.nih.gov/pubmed/27942286 http://dx.doi.org/10.4021/gr2010.06.214w |
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