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A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer

BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and co...

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Autores principales: Ochs-Balcom, Heather M., L.Thompson, Cheryl, Plummer, Sarah, Luo, Guangbin, Tucker, Thomas C., Casey, Graham, Li, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elmer Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139762/
https://www.ncbi.nlm.nih.gov/pubmed/27942286
http://dx.doi.org/10.4021/gr2010.06.214w
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author Ochs-Balcom, Heather M.
L.Thompson, Cheryl
Plummer, Sarah
Luo, Guangbin
Tucker, Thomas C.
Casey, Graham
Li, Li
author_facet Ochs-Balcom, Heather M.
L.Thompson, Cheryl
Plummer, Sarah
Luo, Guangbin
Tucker, Thomas C.
Casey, Graham
Li, Li
author_sort Ochs-Balcom, Heather M.
collection PubMed
description BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and colon cancer in a population-based study of 390 colon cancer cases and 464 population controls. RESULTS: While both crude and covariate-adjusted single SNP analyses were only suggestive for an association with borderline significance (p = 0.07), haplotype analysis shows that individuals carrying the T-G haplotype (rs820196 common allele and rs4789223 minor allele) were at significantly increased risk for colon cancer (OR = 1.34, 95% CI = 1.02-1.76, p = 0.05). Adjustment for age, sex, body mass index, non-steroidal anti-inflammatory use and family history of colon cancer did not alter the results. CONCLUSIONS: These results suggest that a haplotype harboring the minor allele of rs4789223 is associated with colon cancer risk. Further study of RECQL5 as a colon cancer susceptibility gene is warranted, particularly with respect to variants in linkage disequilibrium with rs4789223.
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spelling pubmed-51397622016-12-09 A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer Ochs-Balcom, Heather M. L.Thompson, Cheryl Plummer, Sarah Luo, Guangbin Tucker, Thomas C. Casey, Graham Li, Li Gastroenterology Res Original Article BACKGROUND: Emerging murine model data suggests RecQ protein-like 5 (RECQL5) is a tumor suppressor gene. The goal of our study was to test whether RECQL5 gene variants are associated with colon cancer susceptibility. METHODS: We examined the association of two haplotype-tagging SNPs in RECQL5 and colon cancer in a population-based study of 390 colon cancer cases and 464 population controls. RESULTS: While both crude and covariate-adjusted single SNP analyses were only suggestive for an association with borderline significance (p = 0.07), haplotype analysis shows that individuals carrying the T-G haplotype (rs820196 common allele and rs4789223 minor allele) were at significantly increased risk for colon cancer (OR = 1.34, 95% CI = 1.02-1.76, p = 0.05). Adjustment for age, sex, body mass index, non-steroidal anti-inflammatory use and family history of colon cancer did not alter the results. CONCLUSIONS: These results suggest that a haplotype harboring the minor allele of rs4789223 is associated with colon cancer risk. Further study of RECQL5 as a colon cancer susceptibility gene is warranted, particularly with respect to variants in linkage disequilibrium with rs4789223. Elmer Press 2010-06 2010-05-20 /pmc/articles/PMC5139762/ /pubmed/27942286 http://dx.doi.org/10.4021/gr2010.06.214w Text en Copyright 2010, Ochs-Balcom et al. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Ochs-Balcom, Heather M.
L.Thompson, Cheryl
Plummer, Sarah
Luo, Guangbin
Tucker, Thomas C.
Casey, Graham
Li, Li
A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title_full A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title_fullStr A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title_full_unstemmed A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title_short A RecQ Protein-like 5 Haplotype is Associated With Colon Cancer
title_sort recq protein-like 5 haplotype is associated with colon cancer
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139762/
https://www.ncbi.nlm.nih.gov/pubmed/27942286
http://dx.doi.org/10.4021/gr2010.06.214w
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