Cargando…
A comprehensive comparison of tools for differential ChIP-seq analysis
ChIP-seq has become a widely adopted genomic assay in recent years to determine binding sites for transcription factors or enrichments for specific histone modifications. Beside detection of enriched or bound regions, an important question is to determine differences between conditions. While this i...
Autores principales: | Steinhauser, Sebastian, Kurzawa, Nils, Eils, Roland, Herrmann, Carl |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5142015/ https://www.ncbi.nlm.nih.gov/pubmed/26764273 http://dx.doi.org/10.1093/bib/bbv110 |
Ejemplares similares
-
The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data
por: Ambrosini, Giovanna, et al.
Publicado: (2016) -
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
por: Zhu, Lihua J, et al.
Publicado: (2010) -
CHANCE: comprehensive software for quality control and validation of ChIP-seq data
por: Diaz, Aaron, et al.
Publicado: (2012) -
ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline
por: Qin, Qian, et al.
Publicado: (2016) -
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data
por: Yan, Huihuang, et al.
Publicado: (2014)