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Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05

The glycogen branching enzyme (EC 2.4.1.18), which catalyses the formation of α-1,6-glycosidic branch points in glycogen structure, is often used to enhance the nutritional value and quality of food and beverages. In order to be applicable in industries, enzymes that are stable and active at high te...

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Autores principales: Mohtar, Nur Syazwani, Abdul Rahman, Mohd Basyaruddin, Raja Abd Rahman, Raja Noor Zaliha, Leow, Thean Chor, Salleh, Abu Bakar, Mat Isa, Mohd Noor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5144683/
https://www.ncbi.nlm.nih.gov/pubmed/27957389
http://dx.doi.org/10.7717/peerj.2714
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author Mohtar, Nur Syazwani
Abdul Rahman, Mohd Basyaruddin
Raja Abd Rahman, Raja Noor Zaliha
Leow, Thean Chor
Salleh, Abu Bakar
Mat Isa, Mohd Noor
author_facet Mohtar, Nur Syazwani
Abdul Rahman, Mohd Basyaruddin
Raja Abd Rahman, Raja Noor Zaliha
Leow, Thean Chor
Salleh, Abu Bakar
Mat Isa, Mohd Noor
author_sort Mohtar, Nur Syazwani
collection PubMed
description The glycogen branching enzyme (EC 2.4.1.18), which catalyses the formation of α-1,6-glycosidic branch points in glycogen structure, is often used to enhance the nutritional value and quality of food and beverages. In order to be applicable in industries, enzymes that are stable and active at high temperature are much desired. Using genome mining, the nucleotide sequence of the branching enzyme gene (glgB) was extracted from the Geobacillus mahadia Geo-05 genome sequence provided by the Malaysia Genome Institute. The size of the gene is 2013 bp, and the theoretical molecular weight of the protein is 78.43 kDa. The gene sequence was then used to predict the thermostability, function and the three dimensional structure of the enzyme. The gene was cloned and overexpressed in E. coli to verify the predicted result experimentally. The purified enzyme was used to study the effect of temperature and pH on enzyme activity and stability, and the inhibitory effect by metal ion on enzyme activity. This thermostable glycogen branching enzyme was found to be most active at 55 °C, and the half-life at 60 °C and 70 °C was 24 h and 5 h, respectively. From this research, a thermostable glycogen branching enzyme was successfully isolated from Geobacillus mahadia Geo-05 by genome mining together with molecular biology technique.
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spelling pubmed-51446832016-12-12 Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05 Mohtar, Nur Syazwani Abdul Rahman, Mohd Basyaruddin Raja Abd Rahman, Raja Noor Zaliha Leow, Thean Chor Salleh, Abu Bakar Mat Isa, Mohd Noor PeerJ Biotechnology The glycogen branching enzyme (EC 2.4.1.18), which catalyses the formation of α-1,6-glycosidic branch points in glycogen structure, is often used to enhance the nutritional value and quality of food and beverages. In order to be applicable in industries, enzymes that are stable and active at high temperature are much desired. Using genome mining, the nucleotide sequence of the branching enzyme gene (glgB) was extracted from the Geobacillus mahadia Geo-05 genome sequence provided by the Malaysia Genome Institute. The size of the gene is 2013 bp, and the theoretical molecular weight of the protein is 78.43 kDa. The gene sequence was then used to predict the thermostability, function and the three dimensional structure of the enzyme. The gene was cloned and overexpressed in E. coli to verify the predicted result experimentally. The purified enzyme was used to study the effect of temperature and pH on enzyme activity and stability, and the inhibitory effect by metal ion on enzyme activity. This thermostable glycogen branching enzyme was found to be most active at 55 °C, and the half-life at 60 °C and 70 °C was 24 h and 5 h, respectively. From this research, a thermostable glycogen branching enzyme was successfully isolated from Geobacillus mahadia Geo-05 by genome mining together with molecular biology technique. PeerJ Inc. 2016-12-06 /pmc/articles/PMC5144683/ /pubmed/27957389 http://dx.doi.org/10.7717/peerj.2714 Text en ©2016 Mohtar et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biotechnology
Mohtar, Nur Syazwani
Abdul Rahman, Mohd Basyaruddin
Raja Abd Rahman, Raja Noor Zaliha
Leow, Thean Chor
Salleh, Abu Bakar
Mat Isa, Mohd Noor
Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title_full Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title_fullStr Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title_full_unstemmed Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title_short Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
title_sort expression and characterization of thermostable glycogen branching enzyme from geobacillus mahadia geo-05
topic Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5144683/
https://www.ncbi.nlm.nih.gov/pubmed/27957389
http://dx.doi.org/10.7717/peerj.2714
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