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Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex

Dimensionality reduction has been applied in various brain areas to study the activity of populations of neurons. To interpret the outputs of dimensionality reduction, it is important to first understand its outputs for brain areas for which the relationship between the stimulus and neural response...

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Detalles Bibliográficos
Autores principales: Cowley, Benjamin R., Smith, Matthew A., Kohn, Adam, Yu, Byron M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147778/
https://www.ncbi.nlm.nih.gov/pubmed/27935935
http://dx.doi.org/10.1371/journal.pcbi.1005185
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author Cowley, Benjamin R.
Smith, Matthew A.
Kohn, Adam
Yu, Byron M.
author_facet Cowley, Benjamin R.
Smith, Matthew A.
Kohn, Adam
Yu, Byron M.
author_sort Cowley, Benjamin R.
collection PubMed
description Dimensionality reduction has been applied in various brain areas to study the activity of populations of neurons. To interpret the outputs of dimensionality reduction, it is important to first understand its outputs for brain areas for which the relationship between the stimulus and neural response is well characterized. Here, we applied principal component analysis (PCA) to trial-averaged neural responses in macaque primary visual cortex (V1) to study two fundamental, population-level questions. First, we characterized how neural complexity relates to stimulus complexity, where complexity is measured using relative comparisons of dimensionality. Second, we assessed the extent to which responses to different stimuli occupy similar dimensions of the population activity space using a novel statistical method. For comparison, we performed the same dimensionality reduction analyses on the activity of a recently-proposed V1 receptive field model and a deep convolutional neural network. Our results show that the dimensionality of the population response changes systematically with alterations in the properties and complexity of the visual stimulus.
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spelling pubmed-51477782016-12-28 Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex Cowley, Benjamin R. Smith, Matthew A. Kohn, Adam Yu, Byron M. PLoS Comput Biol Research Article Dimensionality reduction has been applied in various brain areas to study the activity of populations of neurons. To interpret the outputs of dimensionality reduction, it is important to first understand its outputs for brain areas for which the relationship between the stimulus and neural response is well characterized. Here, we applied principal component analysis (PCA) to trial-averaged neural responses in macaque primary visual cortex (V1) to study two fundamental, population-level questions. First, we characterized how neural complexity relates to stimulus complexity, where complexity is measured using relative comparisons of dimensionality. Second, we assessed the extent to which responses to different stimuli occupy similar dimensions of the population activity space using a novel statistical method. For comparison, we performed the same dimensionality reduction analyses on the activity of a recently-proposed V1 receptive field model and a deep convolutional neural network. Our results show that the dimensionality of the population response changes systematically with alterations in the properties and complexity of the visual stimulus. Public Library of Science 2016-12-09 /pmc/articles/PMC5147778/ /pubmed/27935935 http://dx.doi.org/10.1371/journal.pcbi.1005185 Text en © 2016 Cowley et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cowley, Benjamin R.
Smith, Matthew A.
Kohn, Adam
Yu, Byron M.
Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title_full Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title_fullStr Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title_full_unstemmed Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title_short Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex
title_sort stimulus-driven population activity patterns in macaque primary visual cortex
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147778/
https://www.ncbi.nlm.nih.gov/pubmed/27935935
http://dx.doi.org/10.1371/journal.pcbi.1005185
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