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Genome-Wide Association of Heroin Dependence in Han Chinese
Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to exam...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147879/ https://www.ncbi.nlm.nih.gov/pubmed/27936112 http://dx.doi.org/10.1371/journal.pone.0167388 |
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author | Kalsi, Gursharan Euesden, Jack Coleman, Jonathan R. I. Ducci, Francesca Aliev, Fazil Newhouse, Stephen J. Liu, Xiehe Ma, Xiaohong Wang, Yingcheng Collier, David A. Asherson, Philip Li, Tao Breen, Gerome |
author_facet | Kalsi, Gursharan Euesden, Jack Coleman, Jonathan R. I. Ducci, Francesca Aliev, Fazil Newhouse, Stephen J. Liu, Xiehe Ma, Xiaohong Wang, Yingcheng Collier, David A. Asherson, Philip Li, Tao Breen, Gerome |
author_sort | Kalsi, Gursharan |
collection | PubMed |
description | Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to examining samples of European and African-American origin due to difficulty of recruiting samples from other populations. This is the first study to test a Han Chinese population; we performed a GWAS on a homogeneous sample of 370 Han Chinese subjects diagnosed with heroin dependence using the DSM-IV criteria and 134 ethnically matched controls. Analysis using the diagnostic criteria of heroin dependence yielded suggestive evidence for association between variants in the genes CCDC42 (coiled coil domain 42; p = 2.8x10(-7)) and BRSK2 (BR serine/threonine 2; p = 4.110(−6)). In addition, we found evidence for risk variants within the ARHGEF10 (Rho guanine nucleotide exchange factor 10) gene on chromosome 8 and variants in a region on chromosome 20q13, which is gene-poor but has a concentration of mRNAs and predicted miRNAs. Gene-based association analysis identified genome-wide significant association between variants in CCDC42 and heroin addiction. Additionally, when we investigated shared risk variants between heroin addiction and risk of other addiction-related and psychiatric phenotypes using polygenic risk scores, we found a suggestive relationship with variants predicting tobacco addiction, and a significant relationship with variants predicting schizophrenia. Our genome wide association study of heroin dependence provides data in a novel sample, with functionally plausible results and evidence of genetic data of value to the field. |
format | Online Article Text |
id | pubmed-5147879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-51478792016-12-28 Genome-Wide Association of Heroin Dependence in Han Chinese Kalsi, Gursharan Euesden, Jack Coleman, Jonathan R. I. Ducci, Francesca Aliev, Fazil Newhouse, Stephen J. Liu, Xiehe Ma, Xiaohong Wang, Yingcheng Collier, David A. Asherson, Philip Li, Tao Breen, Gerome PLoS One Research Article Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to examining samples of European and African-American origin due to difficulty of recruiting samples from other populations. This is the first study to test a Han Chinese population; we performed a GWAS on a homogeneous sample of 370 Han Chinese subjects diagnosed with heroin dependence using the DSM-IV criteria and 134 ethnically matched controls. Analysis using the diagnostic criteria of heroin dependence yielded suggestive evidence for association between variants in the genes CCDC42 (coiled coil domain 42; p = 2.8x10(-7)) and BRSK2 (BR serine/threonine 2; p = 4.110(−6)). In addition, we found evidence for risk variants within the ARHGEF10 (Rho guanine nucleotide exchange factor 10) gene on chromosome 8 and variants in a region on chromosome 20q13, which is gene-poor but has a concentration of mRNAs and predicted miRNAs. Gene-based association analysis identified genome-wide significant association between variants in CCDC42 and heroin addiction. Additionally, when we investigated shared risk variants between heroin addiction and risk of other addiction-related and psychiatric phenotypes using polygenic risk scores, we found a suggestive relationship with variants predicting tobacco addiction, and a significant relationship with variants predicting schizophrenia. Our genome wide association study of heroin dependence provides data in a novel sample, with functionally plausible results and evidence of genetic data of value to the field. Public Library of Science 2016-12-09 /pmc/articles/PMC5147879/ /pubmed/27936112 http://dx.doi.org/10.1371/journal.pone.0167388 Text en © 2016 Kalsi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kalsi, Gursharan Euesden, Jack Coleman, Jonathan R. I. Ducci, Francesca Aliev, Fazil Newhouse, Stephen J. Liu, Xiehe Ma, Xiaohong Wang, Yingcheng Collier, David A. Asherson, Philip Li, Tao Breen, Gerome Genome-Wide Association of Heroin Dependence in Han Chinese |
title | Genome-Wide Association of Heroin Dependence in Han Chinese |
title_full | Genome-Wide Association of Heroin Dependence in Han Chinese |
title_fullStr | Genome-Wide Association of Heroin Dependence in Han Chinese |
title_full_unstemmed | Genome-Wide Association of Heroin Dependence in Han Chinese |
title_short | Genome-Wide Association of Heroin Dependence in Han Chinese |
title_sort | genome-wide association of heroin dependence in han chinese |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147879/ https://www.ncbi.nlm.nih.gov/pubmed/27936112 http://dx.doi.org/10.1371/journal.pone.0167388 |
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