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Genome-Wide Association of Heroin Dependence in Han Chinese

Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to exam...

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Autores principales: Kalsi, Gursharan, Euesden, Jack, Coleman, Jonathan R. I., Ducci, Francesca, Aliev, Fazil, Newhouse, Stephen J., Liu, Xiehe, Ma, Xiaohong, Wang, Yingcheng, Collier, David A., Asherson, Philip, Li, Tao, Breen, Gerome
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147879/
https://www.ncbi.nlm.nih.gov/pubmed/27936112
http://dx.doi.org/10.1371/journal.pone.0167388
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author Kalsi, Gursharan
Euesden, Jack
Coleman, Jonathan R. I.
Ducci, Francesca
Aliev, Fazil
Newhouse, Stephen J.
Liu, Xiehe
Ma, Xiaohong
Wang, Yingcheng
Collier, David A.
Asherson, Philip
Li, Tao
Breen, Gerome
author_facet Kalsi, Gursharan
Euesden, Jack
Coleman, Jonathan R. I.
Ducci, Francesca
Aliev, Fazil
Newhouse, Stephen J.
Liu, Xiehe
Ma, Xiaohong
Wang, Yingcheng
Collier, David A.
Asherson, Philip
Li, Tao
Breen, Gerome
author_sort Kalsi, Gursharan
collection PubMed
description Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to examining samples of European and African-American origin due to difficulty of recruiting samples from other populations. This is the first study to test a Han Chinese population; we performed a GWAS on a homogeneous sample of 370 Han Chinese subjects diagnosed with heroin dependence using the DSM-IV criteria and 134 ethnically matched controls. Analysis using the diagnostic criteria of heroin dependence yielded suggestive evidence for association between variants in the genes CCDC42 (coiled coil domain 42; p = 2.8x10(-7)) and BRSK2 (BR serine/threonine 2; p = 4.110(−6)). In addition, we found evidence for risk variants within the ARHGEF10 (Rho guanine nucleotide exchange factor 10) gene on chromosome 8 and variants in a region on chromosome 20q13, which is gene-poor but has a concentration of mRNAs and predicted miRNAs. Gene-based association analysis identified genome-wide significant association between variants in CCDC42 and heroin addiction. Additionally, when we investigated shared risk variants between heroin addiction and risk of other addiction-related and psychiatric phenotypes using polygenic risk scores, we found a suggestive relationship with variants predicting tobacco addiction, and a significant relationship with variants predicting schizophrenia. Our genome wide association study of heroin dependence provides data in a novel sample, with functionally plausible results and evidence of genetic data of value to the field.
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spelling pubmed-51478792016-12-28 Genome-Wide Association of Heroin Dependence in Han Chinese Kalsi, Gursharan Euesden, Jack Coleman, Jonathan R. I. Ducci, Francesca Aliev, Fazil Newhouse, Stephen J. Liu, Xiehe Ma, Xiaohong Wang, Yingcheng Collier, David A. Asherson, Philip Li, Tao Breen, Gerome PLoS One Research Article Drug addiction is a costly and recurring healthcare problem, necessitating a need to understand risk factors and mechanisms of addiction, and to identify new biomarkers. To date, genome-wide association studies (GWAS) for heroin addiction have been limited; moreover they have been restricted to examining samples of European and African-American origin due to difficulty of recruiting samples from other populations. This is the first study to test a Han Chinese population; we performed a GWAS on a homogeneous sample of 370 Han Chinese subjects diagnosed with heroin dependence using the DSM-IV criteria and 134 ethnically matched controls. Analysis using the diagnostic criteria of heroin dependence yielded suggestive evidence for association between variants in the genes CCDC42 (coiled coil domain 42; p = 2.8x10(-7)) and BRSK2 (BR serine/threonine 2; p = 4.110(−6)). In addition, we found evidence for risk variants within the ARHGEF10 (Rho guanine nucleotide exchange factor 10) gene on chromosome 8 and variants in a region on chromosome 20q13, which is gene-poor but has a concentration of mRNAs and predicted miRNAs. Gene-based association analysis identified genome-wide significant association between variants in CCDC42 and heroin addiction. Additionally, when we investigated shared risk variants between heroin addiction and risk of other addiction-related and psychiatric phenotypes using polygenic risk scores, we found a suggestive relationship with variants predicting tobacco addiction, and a significant relationship with variants predicting schizophrenia. Our genome wide association study of heroin dependence provides data in a novel sample, with functionally plausible results and evidence of genetic data of value to the field. Public Library of Science 2016-12-09 /pmc/articles/PMC5147879/ /pubmed/27936112 http://dx.doi.org/10.1371/journal.pone.0167388 Text en © 2016 Kalsi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kalsi, Gursharan
Euesden, Jack
Coleman, Jonathan R. I.
Ducci, Francesca
Aliev, Fazil
Newhouse, Stephen J.
Liu, Xiehe
Ma, Xiaohong
Wang, Yingcheng
Collier, David A.
Asherson, Philip
Li, Tao
Breen, Gerome
Genome-Wide Association of Heroin Dependence in Han Chinese
title Genome-Wide Association of Heroin Dependence in Han Chinese
title_full Genome-Wide Association of Heroin Dependence in Han Chinese
title_fullStr Genome-Wide Association of Heroin Dependence in Han Chinese
title_full_unstemmed Genome-Wide Association of Heroin Dependence in Han Chinese
title_short Genome-Wide Association of Heroin Dependence in Han Chinese
title_sort genome-wide association of heroin dependence in han chinese
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147879/
https://www.ncbi.nlm.nih.gov/pubmed/27936112
http://dx.doi.org/10.1371/journal.pone.0167388
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