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Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field

Thirty-one nodulating rhizobium strains were collected from root nodules of spring and winter type faba bean cultivars grown in micro ecoarea, i.e. the same field in Chengdu plain, China. The symbiotic efficiency and phylogeny of these strains were studied. Effectively nitrogen fixing strains were i...

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Autores principales: Zou, Lan, Chen, Yuan Xue, Penttinen, Petri, Lan, Qin, Wang, Ke, Liu, Ming, Peng, Dan, Zhang, Xiaoping, Chen, Qiang, Zhao, Ke, Zeng, Xiangzhong, Xu, Kai Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147995/
https://www.ncbi.nlm.nih.gov/pubmed/27936180
http://dx.doi.org/10.1371/journal.pone.0167804
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author Zou, Lan
Chen, Yuan Xue
Penttinen, Petri
Lan, Qin
Wang, Ke
Liu, Ming
Peng, Dan
Zhang, Xiaoping
Chen, Qiang
Zhao, Ke
Zeng, Xiangzhong
Xu, Kai Wei
author_facet Zou, Lan
Chen, Yuan Xue
Penttinen, Petri
Lan, Qin
Wang, Ke
Liu, Ming
Peng, Dan
Zhang, Xiaoping
Chen, Qiang
Zhao, Ke
Zeng, Xiangzhong
Xu, Kai Wei
author_sort Zou, Lan
collection PubMed
description Thirty-one nodulating rhizobium strains were collected from root nodules of spring and winter type faba bean cultivars grown in micro ecoarea, i.e. the same field in Chengdu plain, China. The symbiotic efficiency and phylogeny of these strains were studied. Effectively nitrogen fixing strains were isolated from both winter type and spring type cultivars. Based on phylogenetic analysis of 16S rRNA gene and concatenated sequence of atpD, glnII and recA genes, the isolates were assigned as Rhizobium anhuiense and a potential new Rhizobium species. The isolates were diverse on symbiosis related gene level, carrying five, four and three variants of nifH, nodC and nodD, respectively. Strains carrying similar gene combinations were trapped by both winter and spring cultivars, disagreeing with the specificity of symbiotic genotypes to reported earlier faba bean ecotypes.
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spelling pubmed-51479952016-12-28 Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field Zou, Lan Chen, Yuan Xue Penttinen, Petri Lan, Qin Wang, Ke Liu, Ming Peng, Dan Zhang, Xiaoping Chen, Qiang Zhao, Ke Zeng, Xiangzhong Xu, Kai Wei PLoS One Research Article Thirty-one nodulating rhizobium strains were collected from root nodules of spring and winter type faba bean cultivars grown in micro ecoarea, i.e. the same field in Chengdu plain, China. The symbiotic efficiency and phylogeny of these strains were studied. Effectively nitrogen fixing strains were isolated from both winter type and spring type cultivars. Based on phylogenetic analysis of 16S rRNA gene and concatenated sequence of atpD, glnII and recA genes, the isolates were assigned as Rhizobium anhuiense and a potential new Rhizobium species. The isolates were diverse on symbiosis related gene level, carrying five, four and three variants of nifH, nodC and nodD, respectively. Strains carrying similar gene combinations were trapped by both winter and spring cultivars, disagreeing with the specificity of symbiotic genotypes to reported earlier faba bean ecotypes. Public Library of Science 2016-12-09 /pmc/articles/PMC5147995/ /pubmed/27936180 http://dx.doi.org/10.1371/journal.pone.0167804 Text en © 2016 Zou et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zou, Lan
Chen, Yuan Xue
Penttinen, Petri
Lan, Qin
Wang, Ke
Liu, Ming
Peng, Dan
Zhang, Xiaoping
Chen, Qiang
Zhao, Ke
Zeng, Xiangzhong
Xu, Kai Wei
Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title_full Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title_fullStr Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title_full_unstemmed Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title_short Genetic Diversity and Symbiotic Efficiency of Nodulating Rhizobia Isolated from Root Nodules of Faba Bean in One Field
title_sort genetic diversity and symbiotic efficiency of nodulating rhizobia isolated from root nodules of faba bean in one field
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147995/
https://www.ncbi.nlm.nih.gov/pubmed/27936180
http://dx.doi.org/10.1371/journal.pone.0167804
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