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A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease

BACKGROUND: Several genome-wide association studies revealed that several variants of UMOD gene were related to the estimated glomerular filtration rate (eGFR), CKD or hypertension. In this study, we investigated the association between a common variant rs13333226 in the promoter region of UMOD gene...

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Autores principales: Chen, Tingyu, Wang, Qianliao, Li, Guisen, Wang, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5148830/
https://www.ncbi.nlm.nih.gov/pubmed/27938332
http://dx.doi.org/10.1186/s12881-016-0358-3
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author Chen, Tingyu
Wang, Qianliao
Li, Guisen
Wang, Li
author_facet Chen, Tingyu
Wang, Qianliao
Li, Guisen
Wang, Li
author_sort Chen, Tingyu
collection PubMed
description BACKGROUND: Several genome-wide association studies revealed that several variants of UMOD gene were related to the estimated glomerular filtration rate (eGFR), CKD or hypertension. In this study, we investigated the association between a common variant rs13333226 in the promoter region of UMOD gene and end stage renal disease (ESRD). METHODS: Variant rs13333226 of UMOD gene was genotyped by using the ABI Real time TaqMan allelic discrimination assay in a case-control study including 638 unrelated patients with ESRD and 366 controls. RESULTS: The frequency of UMOD SNP rs13333226 GG/GA genotype was significantly higher (36.83% vs. 20.22%, P = 4.02 × 10(-8)) and the frequency of G allele was much higher (19.04% vs. 11.20%, P = 4.00 × 10(−6)) in the patients with ESRD than in the controls. The G allele was associated with an increased risk of ESRD (odds ratio 2.30, 95% confidence interval 1.70–3.11, P = 6.10 × 10(−8)). And G allele (odds ratio 2.33, 95% confidence interval 1.32–4.13, P = 3.65 × 10(−3)) was associated independently with ESRD. CONCLUSIONS: A common variation rs13333226 in the promoter region of UMOD gene was independently associated with ESRD in Han Chinese.
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spelling pubmed-51488302016-12-15 A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease Chen, Tingyu Wang, Qianliao Li, Guisen Wang, Li BMC Med Genet Research Article BACKGROUND: Several genome-wide association studies revealed that several variants of UMOD gene were related to the estimated glomerular filtration rate (eGFR), CKD or hypertension. In this study, we investigated the association between a common variant rs13333226 in the promoter region of UMOD gene and end stage renal disease (ESRD). METHODS: Variant rs13333226 of UMOD gene was genotyped by using the ABI Real time TaqMan allelic discrimination assay in a case-control study including 638 unrelated patients with ESRD and 366 controls. RESULTS: The frequency of UMOD SNP rs13333226 GG/GA genotype was significantly higher (36.83% vs. 20.22%, P = 4.02 × 10(-8)) and the frequency of G allele was much higher (19.04% vs. 11.20%, P = 4.00 × 10(−6)) in the patients with ESRD than in the controls. The G allele was associated with an increased risk of ESRD (odds ratio 2.30, 95% confidence interval 1.70–3.11, P = 6.10 × 10(−8)). And G allele (odds ratio 2.33, 95% confidence interval 1.32–4.13, P = 3.65 × 10(−3)) was associated independently with ESRD. CONCLUSIONS: A common variation rs13333226 in the promoter region of UMOD gene was independently associated with ESRD in Han Chinese. BioMed Central 2016-12-09 /pmc/articles/PMC5148830/ /pubmed/27938332 http://dx.doi.org/10.1186/s12881-016-0358-3 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Chen, Tingyu
Wang, Qianliao
Li, Guisen
Wang, Li
A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title_full A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title_fullStr A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title_full_unstemmed A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title_short A single nucleotide polymorphism in the UMOD promoter is associated with end stage renal disease
title_sort single nucleotide polymorphism in the umod promoter is associated with end stage renal disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5148830/
https://www.ncbi.nlm.nih.gov/pubmed/27938332
http://dx.doi.org/10.1186/s12881-016-0358-3
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