Cargando…

The biogeography of soil archaeal communities on the eastern Tibetan Plateau

The biogeographical distribution of soil bacterial communities has been widely investigated. However, there has been little study of the biogeography of soil archaeal communities on a regional scale. Here, using high-throughput sequencing, we characterized the archaeal communities of 94 soil samples...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Yu, Adams, Jonathan M., Ni, Yingying, Yang, Teng, Jing, Xin, Chen, Litong, He, Jin-Sheng, Chu, Haiyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5153633/
https://www.ncbi.nlm.nih.gov/pubmed/27958324
http://dx.doi.org/10.1038/srep38893
_version_ 1782474731064131584
author Shi, Yu
Adams, Jonathan M.
Ni, Yingying
Yang, Teng
Jing, Xin
Chen, Litong
He, Jin-Sheng
Chu, Haiyan
author_facet Shi, Yu
Adams, Jonathan M.
Ni, Yingying
Yang, Teng
Jing, Xin
Chen, Litong
He, Jin-Sheng
Chu, Haiyan
author_sort Shi, Yu
collection PubMed
description The biogeographical distribution of soil bacterial communities has been widely investigated. However, there has been little study of the biogeography of soil archaeal communities on a regional scale. Here, using high-throughput sequencing, we characterized the archaeal communities of 94 soil samples across the eastern Tibetan Plateau. Thaumarchaeota was the predominant archael phylum in all the soils, and Halobacteria was dominant only in dry soils. Archaeal community composition was significantly correlated with soil moisture content and C:N ratio, and archaeal phylotype richness was negatively correlated with soil moisture content (r = −0.47, P < 0.01). Spatial distance, a potential measure of the legacy effect of evolutionary and dispersal factors, was less important than measured environmental factors in determining the broad scale archaeal community pattern. These results indicate that soil moisture and C:N ratio are the key factors structuring soil archaeal communities on the eastern Tibetan Plateau. Our findings suggest that archaeal communities have adjusted their distributions rapidly enough to reach range equilibrium in relation to past environmental changes e.g. in water availability and soil nutrient status. This responsiveness may allow better prediction of future responses of soil archaea to environmental change in these sensitive ecosystems.
format Online
Article
Text
id pubmed-5153633
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-51536332016-12-28 The biogeography of soil archaeal communities on the eastern Tibetan Plateau Shi, Yu Adams, Jonathan M. Ni, Yingying Yang, Teng Jing, Xin Chen, Litong He, Jin-Sheng Chu, Haiyan Sci Rep Article The biogeographical distribution of soil bacterial communities has been widely investigated. However, there has been little study of the biogeography of soil archaeal communities on a regional scale. Here, using high-throughput sequencing, we characterized the archaeal communities of 94 soil samples across the eastern Tibetan Plateau. Thaumarchaeota was the predominant archael phylum in all the soils, and Halobacteria was dominant only in dry soils. Archaeal community composition was significantly correlated with soil moisture content and C:N ratio, and archaeal phylotype richness was negatively correlated with soil moisture content (r = −0.47, P < 0.01). Spatial distance, a potential measure of the legacy effect of evolutionary and dispersal factors, was less important than measured environmental factors in determining the broad scale archaeal community pattern. These results indicate that soil moisture and C:N ratio are the key factors structuring soil archaeal communities on the eastern Tibetan Plateau. Our findings suggest that archaeal communities have adjusted their distributions rapidly enough to reach range equilibrium in relation to past environmental changes e.g. in water availability and soil nutrient status. This responsiveness may allow better prediction of future responses of soil archaea to environmental change in these sensitive ecosystems. Nature Publishing Group 2016-12-13 /pmc/articles/PMC5153633/ /pubmed/27958324 http://dx.doi.org/10.1038/srep38893 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Shi, Yu
Adams, Jonathan M.
Ni, Yingying
Yang, Teng
Jing, Xin
Chen, Litong
He, Jin-Sheng
Chu, Haiyan
The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title_full The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title_fullStr The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title_full_unstemmed The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title_short The biogeography of soil archaeal communities on the eastern Tibetan Plateau
title_sort biogeography of soil archaeal communities on the eastern tibetan plateau
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5153633/
https://www.ncbi.nlm.nih.gov/pubmed/27958324
http://dx.doi.org/10.1038/srep38893
work_keys_str_mv AT shiyu thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT adamsjonathanm thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT niyingying thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT yangteng thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT jingxin thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT chenlitong thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT hejinsheng thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT chuhaiyan thebiogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT shiyu biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT adamsjonathanm biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT niyingying biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT yangteng biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT jingxin biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT chenlitong biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT hejinsheng biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau
AT chuhaiyan biogeographyofsoilarchaealcommunitiesontheeasterntibetanplateau