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Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma
Circular RNAs (circRNAs) have emerged as novel molecules of interest in gene regulation as other noncoding RNAs. Though they have been explored in some species and tissues, the expression and functions of circRNAs in human reproductive systems remain unknown. Here we revealed the expression profiles...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5153637/ https://www.ncbi.nlm.nih.gov/pubmed/27958373 http://dx.doi.org/10.1038/srep39080 |
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author | Dong, Wei-Wei Li, Hui-Min Qing, Xing-Rong Huang, Dong-Hui Li, Hong-Gang |
author_facet | Dong, Wei-Wei Li, Hui-Min Qing, Xing-Rong Huang, Dong-Hui Li, Hong-Gang |
author_sort | Dong, Wei-Wei |
collection | PubMed |
description | Circular RNAs (circRNAs) have emerged as novel molecules of interest in gene regulation as other noncoding RNAs. Though they have been explored in some species and tissues, the expression and functions of circRNAs in human reproductive systems remain unknown. Here we revealed the expression profiles of circRNAs in human testis tissue using high-throughput sequencing. The conformation of these testis-derived circRNAs in seminal plasma was also investigated, aiming to provide a non-invasive liquid biopsy surrogate for testicular biopsy. We predicted >15,000 circRNAs in human testis, with most of them (10,792; 67%) new. In all the 5,928 circRNA forming genes, 1,017 are first reported by us to generate circRNAs. Interestingly, these genes are mostly related to spermatogenesis, sperm motility, fertilization, etc. The sequence feature, chromosome location, alternative splicing and other characteristics of the circRNAs in human testis were also explored. Moreover, we found that these testis-derived circRNAs could be stably detected in seminal plasma. Most of them were probably bound with proteins in seminal plasma and were very stable at room temperature. Our work has laid the foundations to decipher regulation mechanisms of circRNAs in spermatogenesis and to develop circRNAs as novel noninvasive biomarkers for male infertile diseases. |
format | Online Article Text |
id | pubmed-5153637 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-51536372016-12-28 Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma Dong, Wei-Wei Li, Hui-Min Qing, Xing-Rong Huang, Dong-Hui Li, Hong-Gang Sci Rep Article Circular RNAs (circRNAs) have emerged as novel molecules of interest in gene regulation as other noncoding RNAs. Though they have been explored in some species and tissues, the expression and functions of circRNAs in human reproductive systems remain unknown. Here we revealed the expression profiles of circRNAs in human testis tissue using high-throughput sequencing. The conformation of these testis-derived circRNAs in seminal plasma was also investigated, aiming to provide a non-invasive liquid biopsy surrogate for testicular biopsy. We predicted >15,000 circRNAs in human testis, with most of them (10,792; 67%) new. In all the 5,928 circRNA forming genes, 1,017 are first reported by us to generate circRNAs. Interestingly, these genes are mostly related to spermatogenesis, sperm motility, fertilization, etc. The sequence feature, chromosome location, alternative splicing and other characteristics of the circRNAs in human testis were also explored. Moreover, we found that these testis-derived circRNAs could be stably detected in seminal plasma. Most of them were probably bound with proteins in seminal plasma and were very stable at room temperature. Our work has laid the foundations to decipher regulation mechanisms of circRNAs in spermatogenesis and to develop circRNAs as novel noninvasive biomarkers for male infertile diseases. Nature Publishing Group 2016-12-13 /pmc/articles/PMC5153637/ /pubmed/27958373 http://dx.doi.org/10.1038/srep39080 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Dong, Wei-Wei Li, Hui-Min Qing, Xing-Rong Huang, Dong-Hui Li, Hong-Gang Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title | Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title_full | Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title_fullStr | Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title_full_unstemmed | Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title_short | Identification and characterization of human testis derived circular RNAs and their existence in seminal plasma |
title_sort | identification and characterization of human testis derived circular rnas and their existence in seminal plasma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5153637/ https://www.ncbi.nlm.nih.gov/pubmed/27958373 http://dx.doi.org/10.1038/srep39080 |
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