Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop

This special issue covers selected papers from the 18th Bio-Ontologies Special Interest Group meeting and Phenotype Day, which took place at the Intelligent Systems for Molecular Biology (ISMB) conference in Dublin in 2015. The papers presented in this collection range from descriptions of software...

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Autores principales: Verspoor, Karin, Oellrich, Anika, Collier, Nigel, Groza, Tudor, Rocca-Serra, Philippe, Soldatova, Larisa, Dumontier, Michel, Shah, Nigam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Short Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154111/
https://www.ncbi.nlm.nih.gov/pubmed/27955708
http://dx.doi.org/10.1186/s13326-016-0108-7
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author Verspoor, Karin
Oellrich, Anika
Collier, Nigel
Groza, Tudor
Rocca-Serra, Philippe
Soldatova, Larisa
Dumontier, Michel
Shah, Nigam
author_facet Verspoor, Karin
Oellrich, Anika
Collier, Nigel
Groza, Tudor
Rocca-Serra, Philippe
Soldatova, Larisa
Dumontier, Michel
Shah, Nigam
author_sort Verspoor, Karin
collection PubMed
description This special issue covers selected papers from the 18th Bio-Ontologies Special Interest Group meeting and Phenotype Day, which took place at the Intelligent Systems for Molecular Biology (ISMB) conference in Dublin in 2015. The papers presented in this collection range from descriptions of software tools supporting ontology development and annotation of objects with ontology terms, to applications of text mining for structured relation extraction involving diseases and phenotypes, to detailed proposals for new ontologies and mapping of existing ontologies. Together, the papers consider a range of representational issues in bio-ontology development, and demonstrate the applicability of bio-ontologies to support biological and clinical knowledge-based decision making and analysis. The full set of papers in the Thematic Issue is available at http://www.biomedcentral.com/collections/sig.
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spelling pubmed-51541112016-12-20 Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop Verspoor, Karin Oellrich, Anika Collier, Nigel Groza, Tudor Rocca-Serra, Philippe Soldatova, Larisa Dumontier, Michel Shah, Nigam J Biomed Semantics Short Report This special issue covers selected papers from the 18th Bio-Ontologies Special Interest Group meeting and Phenotype Day, which took place at the Intelligent Systems for Molecular Biology (ISMB) conference in Dublin in 2015. The papers presented in this collection range from descriptions of software tools supporting ontology development and annotation of objects with ontology terms, to applications of text mining for structured relation extraction involving diseases and phenotypes, to detailed proposals for new ontologies and mapping of existing ontologies. Together, the papers consider a range of representational issues in bio-ontology development, and demonstrate the applicability of bio-ontologies to support biological and clinical knowledge-based decision making and analysis. The full set of papers in the Thematic Issue is available at http://www.biomedcentral.com/collections/sig. BioMed Central 2016-12-12 /pmc/articles/PMC5154111/ /pubmed/27955708 http://dx.doi.org/10.1186/s13326-016-0108-7 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Report
Verspoor, Karin
Oellrich, Anika
Collier, Nigel
Groza, Tudor
Rocca-Serra, Philippe
Soldatova, Larisa
Dumontier, Michel
Shah, Nigam
Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title_full Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title_fullStr Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title_full_unstemmed Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title_short Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop
title_sort thematic issue of the second combined bio-ontologies and phenotypes workshop
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154111/
https://www.ncbi.nlm.nih.gov/pubmed/27955708
http://dx.doi.org/10.1186/s13326-016-0108-7
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