Cargando…
Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern
Oral cancer is a major health challenge in the Indian subcontinent and a dreadful form of cancers worldwide. The current study is focused on the identification of distinguished metabolites of oral cancer tissue samples in comparison with precancerous and control tissue samples using gas chromatograp...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154177/ https://www.ncbi.nlm.nih.gov/pubmed/27958349 http://dx.doi.org/10.1038/srep38985 |
_version_ | 1782474834096160768 |
---|---|
author | Musharraf, Syed Ghulam Shahid, Najia Naqvi, Syed Muhammad Ali Saleem, Mahwish Siddiqui, Amna Jabbar Ali, Anwar |
author_facet | Musharraf, Syed Ghulam Shahid, Najia Naqvi, Syed Muhammad Ali Saleem, Mahwish Siddiqui, Amna Jabbar Ali, Anwar |
author_sort | Musharraf, Syed Ghulam |
collection | PubMed |
description | Oral cancer is a major health challenge in the Indian subcontinent and a dreadful form of cancers worldwide. The current study is focused on the identification of distinguished metabolites of oral cancer tissue samples in comparison with precancerous and control tissue samples using gas chromatography coupled with triple quadrupole tandem mass spectrometry and chemometric analyses. Metabolites obtained were identified through National Institute of Standards and Technology (NIST) mass spectral (Wiley registry) library. Mass Profiler Professional (MPP) software was used for the alignment and for all the statistical analysis. 31 compounds out of 735 found distinguishing among oral cancer, precancerous and control group samples using p-value ≤ 0.05. Partial Least Square Discriminant Analysis (PLSDA) model was generated using statistically significant metabolites gave an overall accuracy of 90.2%. Down-regulated amino acid levels appear to be the result of enhanced energy metabolism or up-regulation of the appropriate biosynthetic pathways, and required cell proliferation in cancer tissues. These results suggest that tissue metabolic profiles have great potential in detecting oral cancer and may aid in understanding its underlying mechanisms. |
format | Online Article Text |
id | pubmed-5154177 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-51541772016-12-28 Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern Musharraf, Syed Ghulam Shahid, Najia Naqvi, Syed Muhammad Ali Saleem, Mahwish Siddiqui, Amna Jabbar Ali, Anwar Sci Rep Article Oral cancer is a major health challenge in the Indian subcontinent and a dreadful form of cancers worldwide. The current study is focused on the identification of distinguished metabolites of oral cancer tissue samples in comparison with precancerous and control tissue samples using gas chromatography coupled with triple quadrupole tandem mass spectrometry and chemometric analyses. Metabolites obtained were identified through National Institute of Standards and Technology (NIST) mass spectral (Wiley registry) library. Mass Profiler Professional (MPP) software was used for the alignment and for all the statistical analysis. 31 compounds out of 735 found distinguishing among oral cancer, precancerous and control group samples using p-value ≤ 0.05. Partial Least Square Discriminant Analysis (PLSDA) model was generated using statistically significant metabolites gave an overall accuracy of 90.2%. Down-regulated amino acid levels appear to be the result of enhanced energy metabolism or up-regulation of the appropriate biosynthetic pathways, and required cell proliferation in cancer tissues. These results suggest that tissue metabolic profiles have great potential in detecting oral cancer and may aid in understanding its underlying mechanisms. Nature Publishing Group 2016-12-13 /pmc/articles/PMC5154177/ /pubmed/27958349 http://dx.doi.org/10.1038/srep38985 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Musharraf, Syed Ghulam Shahid, Najia Naqvi, Syed Muhammad Ali Saleem, Mahwish Siddiqui, Amna Jabbar Ali, Anwar Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title | Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title_full | Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title_fullStr | Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title_full_unstemmed | Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title_short | Metabolite Profiling of Preneoplastic and Neoplastic Lesions of Oral Cavity Tissue Samples Revealed a Biomarker Pattern |
title_sort | metabolite profiling of preneoplastic and neoplastic lesions of oral cavity tissue samples revealed a biomarker pattern |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154177/ https://www.ncbi.nlm.nih.gov/pubmed/27958349 http://dx.doi.org/10.1038/srep38985 |
work_keys_str_mv | AT musharrafsyedghulam metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern AT shahidnajia metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern AT naqvisyedmuhammadali metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern AT saleemmahwish metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern AT siddiquiamnajabbar metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern AT alianwar metaboliteprofilingofpreneoplasticandneoplasticlesionsoforalcavitytissuesamplesrevealedabiomarkerpattern |