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Difference distance map data of alternative crystal forms of UlaA
We introduce the value of information obtained by comparing alternative crystal forms of the same sub-state (of outward open UlaA, our example protein), which is found in the same lattice configuration but different space groups. We compare instability estimates obtained using this new method (alter...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154960/ https://www.ncbi.nlm.nih.gov/pubmed/27995154 http://dx.doi.org/10.1016/j.dib.2016.11.087 |
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author | Vastermark, Ake Driker, Adelle Weng, Jingwei Li, Xiaochun Wang, Jiawei Saier, Milton H. |
author_facet | Vastermark, Ake Driker, Adelle Weng, Jingwei Li, Xiaochun Wang, Jiawei Saier, Milton H. |
author_sort | Vastermark, Ake |
collection | PubMed |
description | We introduce the value of information obtained by comparing alternative crystal forms of the same sub-state (of outward open UlaA, our example protein), which is found in the same lattice configuration but different space groups. We compare instability estimates obtained using this new method (alternative crystal forms) with temperature factors. Using a transport assay result, we correlate observations for two homologous secondary structure elements, and show that the alternative states method for obtaining instability estimates provide differentiating information about an important and immobilized mid-TMS region. The data presented in this article are related to the article entitled “The V-motifs facilitate the substrate capturing step of the PTS elevator mechanism” (A. Vastermark, A. Driker, J. Weng, X. Li, J. Wang, M.H. Saier Jr., 2016). |
format | Online Article Text |
id | pubmed-5154960 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-51549602016-12-19 Difference distance map data of alternative crystal forms of UlaA Vastermark, Ake Driker, Adelle Weng, Jingwei Li, Xiaochun Wang, Jiawei Saier, Milton H. Data Brief Data Article We introduce the value of information obtained by comparing alternative crystal forms of the same sub-state (of outward open UlaA, our example protein), which is found in the same lattice configuration but different space groups. We compare instability estimates obtained using this new method (alternative crystal forms) with temperature factors. Using a transport assay result, we correlate observations for two homologous secondary structure elements, and show that the alternative states method for obtaining instability estimates provide differentiating information about an important and immobilized mid-TMS region. The data presented in this article are related to the article entitled “The V-motifs facilitate the substrate capturing step of the PTS elevator mechanism” (A. Vastermark, A. Driker, J. Weng, X. Li, J. Wang, M.H. Saier Jr., 2016). Elsevier 2016-12-03 /pmc/articles/PMC5154960/ /pubmed/27995154 http://dx.doi.org/10.1016/j.dib.2016.11.087 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Vastermark, Ake Driker, Adelle Weng, Jingwei Li, Xiaochun Wang, Jiawei Saier, Milton H. Difference distance map data of alternative crystal forms of UlaA |
title | Difference distance map data of alternative crystal forms of UlaA |
title_full | Difference distance map data of alternative crystal forms of UlaA |
title_fullStr | Difference distance map data of alternative crystal forms of UlaA |
title_full_unstemmed | Difference distance map data of alternative crystal forms of UlaA |
title_short | Difference distance map data of alternative crystal forms of UlaA |
title_sort | difference distance map data of alternative crystal forms of ulaa |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5154960/ https://www.ncbi.nlm.nih.gov/pubmed/27995154 http://dx.doi.org/10.1016/j.dib.2016.11.087 |
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