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climwin: An R Toolbox for Climate Window Analysis

When studying the impacts of climate change, there is a tendency to select climate data from a small set of arbitrary time periods or climate windows (e.g., spring temperature). However, these arbitrary windows may not encompass the strongest periods of climatic sensitivity and may lead to erroneous...

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Detalles Bibliográficos
Autores principales: Bailey, Liam D., van de Pol, Martijn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156382/
https://www.ncbi.nlm.nih.gov/pubmed/27973534
http://dx.doi.org/10.1371/journal.pone.0167980
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author Bailey, Liam D.
van de Pol, Martijn
author_facet Bailey, Liam D.
van de Pol, Martijn
author_sort Bailey, Liam D.
collection PubMed
description When studying the impacts of climate change, there is a tendency to select climate data from a small set of arbitrary time periods or climate windows (e.g., spring temperature). However, these arbitrary windows may not encompass the strongest periods of climatic sensitivity and may lead to erroneous biological interpretations. Therefore, there is a need to consider a wider range of climate windows to better predict the impacts of future climate change. We introduce the R package climwin that provides a number of methods to test the effect of different climate windows on a chosen response variable and compare these windows to identify potential climate signals. climwin extracts the relevant data for each possible climate window and uses this data to fit a statistical model, the structure of which is chosen by the user. Models are then compared using an information criteria approach. This allows users to determine how well each window explains variation in the response variable and compare model support between windows. climwin also contains methods to detect type I and II errors, which are often a problem with this type of exploratory analysis. This article presents the statistical framework and technical details behind the climwin package and demonstrates the applicability of the method with a number of worked examples.
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spelling pubmed-51563822016-12-28 climwin: An R Toolbox for Climate Window Analysis Bailey, Liam D. van de Pol, Martijn PLoS One Research Article When studying the impacts of climate change, there is a tendency to select climate data from a small set of arbitrary time periods or climate windows (e.g., spring temperature). However, these arbitrary windows may not encompass the strongest periods of climatic sensitivity and may lead to erroneous biological interpretations. Therefore, there is a need to consider a wider range of climate windows to better predict the impacts of future climate change. We introduce the R package climwin that provides a number of methods to test the effect of different climate windows on a chosen response variable and compare these windows to identify potential climate signals. climwin extracts the relevant data for each possible climate window and uses this data to fit a statistical model, the structure of which is chosen by the user. Models are then compared using an information criteria approach. This allows users to determine how well each window explains variation in the response variable and compare model support between windows. climwin also contains methods to detect type I and II errors, which are often a problem with this type of exploratory analysis. This article presents the statistical framework and technical details behind the climwin package and demonstrates the applicability of the method with a number of worked examples. Public Library of Science 2016-12-14 /pmc/articles/PMC5156382/ /pubmed/27973534 http://dx.doi.org/10.1371/journal.pone.0167980 Text en © 2016 Bailey, van de Pol http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bailey, Liam D.
van de Pol, Martijn
climwin: An R Toolbox for Climate Window Analysis
title climwin: An R Toolbox for Climate Window Analysis
title_full climwin: An R Toolbox for Climate Window Analysis
title_fullStr climwin: An R Toolbox for Climate Window Analysis
title_full_unstemmed climwin: An R Toolbox for Climate Window Analysis
title_short climwin: An R Toolbox for Climate Window Analysis
title_sort climwin: an r toolbox for climate window analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156382/
https://www.ncbi.nlm.nih.gov/pubmed/27973534
http://dx.doi.org/10.1371/journal.pone.0167980
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