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Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach

Acute coronary syndrome (ACS) is a life-threatening disease that affects more than half a million people in United States. We currently lack molecular biomarkers to distinguish the unstable angina (UA) and acute myocardial infarction (AMI), which are the two subtypes of ACS. MicroRNAs play significa...

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Autores principales: Zhu, Yujie, Lin, Yuxin, Yan, Wenying, Sun, Zhandong, Jiang, Zhi, Shen, Bairong, Jiang, Xiaoqian, Shi, Jingjing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156791/
https://www.ncbi.nlm.nih.gov/pubmed/28044128
http://dx.doi.org/10.1155/2016/4618323
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author Zhu, Yujie
Lin, Yuxin
Yan, Wenying
Sun, Zhandong
Jiang, Zhi
Shen, Bairong
Jiang, Xiaoqian
Shi, Jingjing
author_facet Zhu, Yujie
Lin, Yuxin
Yan, Wenying
Sun, Zhandong
Jiang, Zhi
Shen, Bairong
Jiang, Xiaoqian
Shi, Jingjing
author_sort Zhu, Yujie
collection PubMed
description Acute coronary syndrome (ACS) is a life-threatening disease that affects more than half a million people in United States. We currently lack molecular biomarkers to distinguish the unstable angina (UA) and acute myocardial infarction (AMI), which are the two subtypes of ACS. MicroRNAs play significant roles in biological processes and serve as good candidates for biomarkers. In this work, we collected microRNA datasets from the Gene Expression Omnibus database and identified specific microRNAs in different subtypes and universal microRNAs in all subtypes based on our novel network-based bioinformatics approach. These microRNAs were studied for ACS association by pathway enrichment analysis of their target genes. AMI and UA were associated with 27 and 26 microRNAs, respectively, nine of them were detected for both AMI and UA, and five from each subtype had been reported previously. The remaining 22 and 21 microRNAs are novel microRNA biomarkers for AMI and UA, respectively. The findings are then supported by pathway enrichment analysis of the targets of these microRNAs. These novel microRNAs deserve further validation and will be helpful for personalized ACS diagnosis.
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spelling pubmed-51567912017-01-02 Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach Zhu, Yujie Lin, Yuxin Yan, Wenying Sun, Zhandong Jiang, Zhi Shen, Bairong Jiang, Xiaoqian Shi, Jingjing Biomed Res Int Research Article Acute coronary syndrome (ACS) is a life-threatening disease that affects more than half a million people in United States. We currently lack molecular biomarkers to distinguish the unstable angina (UA) and acute myocardial infarction (AMI), which are the two subtypes of ACS. MicroRNAs play significant roles in biological processes and serve as good candidates for biomarkers. In this work, we collected microRNA datasets from the Gene Expression Omnibus database and identified specific microRNAs in different subtypes and universal microRNAs in all subtypes based on our novel network-based bioinformatics approach. These microRNAs were studied for ACS association by pathway enrichment analysis of their target genes. AMI and UA were associated with 27 and 26 microRNAs, respectively, nine of them were detected for both AMI and UA, and five from each subtype had been reported previously. The remaining 22 and 21 microRNAs are novel microRNA biomarkers for AMI and UA, respectively. The findings are then supported by pathway enrichment analysis of the targets of these microRNAs. These novel microRNAs deserve further validation and will be helpful for personalized ACS diagnosis. Hindawi Publishing Corporation 2016 2016-12-01 /pmc/articles/PMC5156791/ /pubmed/28044128 http://dx.doi.org/10.1155/2016/4618323 Text en Copyright © 2016 Yujie Zhu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhu, Yujie
Lin, Yuxin
Yan, Wenying
Sun, Zhandong
Jiang, Zhi
Shen, Bairong
Jiang, Xiaoqian
Shi, Jingjing
Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title_full Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title_fullStr Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title_full_unstemmed Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title_short Novel Biomarker MicroRNAs for Subtyping of Acute Coronary Syndrome: A Bioinformatics Approach
title_sort novel biomarker micrornas for subtyping of acute coronary syndrome: a bioinformatics approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5156791/
https://www.ncbi.nlm.nih.gov/pubmed/28044128
http://dx.doi.org/10.1155/2016/4618323
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