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Bacterial Community Structures in Freshwater Polar Environments of Svalbard

Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to rev...

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Autores principales: Ntougias, Spyridon, Polkowska, Żaneta, Nikolaki, Sofia, Dionyssopoulou, Eva, Stathopoulou, Panagiota, Doudoumis, Vangelis, Ruman, Marek, Kozak, Katarzyna, Namieśnik, Jacek, Tsiamis, George
Formato: Online Artículo Texto
Lenguaje:English
Publicado: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/
https://www.ncbi.nlm.nih.gov/pubmed/27725345
http://dx.doi.org/10.1264/jsme2.ME16074
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author Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
author_facet Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
author_sort Ntougias, Spyridon
collection PubMed
description Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to reveal bacterial community structures in stream and lake surface water samples from the Fuglebekken and Revvatnet basins of southern Svalbard. Depending on the samples examined, bacterial communities at a higher taxonomic level mainly consisted either of Bacteroidetes, Betaproteobacteria, and Microgenomates (OP11) or Planctomycetes, Betaproteobacteria, and Bacteroidetes members, whereas a population of Microgenomates was prominent in 2 samples. At the lower taxonomic level, bacterial communities mostly comprised Microgenomates, Comamonadaceae, Flavobacteriaceae, Legionellales, SM2F11, Parcubacteria (OD1), and TM7 members at different proportions in each sample. The abundance of OTUs shared in common among samples was greater than 70%, with the exception of samples in which the proliferation of Planctomycetaceae, Phycisphaeraceae, and Candidatus Methylacidiphilum spp. lowered their relative abundance. A multi-variable analysis indicated that As, Pb, and Sb were the main environmental factors influencing bacterial profiles. We concluded that the bacterial communities in the polar aquatic ecosystems examined mainly consisted of freshwater and marine microorganisms involved in detritus mineralization, with a high proportion of zooplankton-associated taxa also being identified.
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spelling pubmed-51581122016-12-20 Bacterial Community Structures in Freshwater Polar Environments of Svalbard Ntougias, Spyridon Polkowska, Żaneta Nikolaki, Sofia Dionyssopoulou, Eva Stathopoulou, Panagiota Doudoumis, Vangelis Ruman, Marek Kozak, Katarzyna Namieśnik, Jacek Tsiamis, George Microbes Environ Articles Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to reveal bacterial community structures in stream and lake surface water samples from the Fuglebekken and Revvatnet basins of southern Svalbard. Depending on the samples examined, bacterial communities at a higher taxonomic level mainly consisted either of Bacteroidetes, Betaproteobacteria, and Microgenomates (OP11) or Planctomycetes, Betaproteobacteria, and Bacteroidetes members, whereas a population of Microgenomates was prominent in 2 samples. At the lower taxonomic level, bacterial communities mostly comprised Microgenomates, Comamonadaceae, Flavobacteriaceae, Legionellales, SM2F11, Parcubacteria (OD1), and TM7 members at different proportions in each sample. The abundance of OTUs shared in common among samples was greater than 70%, with the exception of samples in which the proliferation of Planctomycetaceae, Phycisphaeraceae, and Candidatus Methylacidiphilum spp. lowered their relative abundance. A multi-variable analysis indicated that As, Pb, and Sb were the main environmental factors influencing bacterial profiles. We concluded that the bacterial communities in the polar aquatic ecosystems examined mainly consisted of freshwater and marine microorganisms involved in detritus mineralization, with a high proportion of zooplankton-associated taxa also being identified. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016-12 2016-09-30 /pmc/articles/PMC5158112/ /pubmed/27725345 http://dx.doi.org/10.1264/jsme2.ME16074 Text en Copyright © 2016 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_full Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_fullStr Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_full_unstemmed Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_short Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_sort bacterial community structures in freshwater polar environments of svalbard
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/
https://www.ncbi.nlm.nih.gov/pubmed/27725345
http://dx.doi.org/10.1264/jsme2.ME16074
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