Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016

Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbr...

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Autores principales: Huang, Weihua, Yin, Changhong, Zhuge, Jian, Farooq, Taliya, Yoon, Esther C., Nolan, Sheila M., Chen, Donald, Fallon, John T., Wang, Guiqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159578/
https://www.ncbi.nlm.nih.gov/pubmed/27979945
http://dx.doi.org/10.1128/genomeA.01394-16
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author Huang, Weihua
Yin, Changhong
Zhuge, Jian
Farooq, Taliya
Yoon, Esther C.
Nolan, Sheila M.
Chen, Donald
Fallon, John T.
Wang, Guiqing
author_facet Huang, Weihua
Yin, Changhong
Zhuge, Jian
Farooq, Taliya
Yoon, Esther C.
Nolan, Sheila M.
Chen, Donald
Fallon, John T.
Wang, Guiqing
author_sort Huang, Weihua
collection PubMed
description Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.
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spelling pubmed-51595782016-12-27 Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016 Huang, Weihua Yin, Changhong Zhuge, Jian Farooq, Taliya Yoon, Esther C. Nolan, Sheila M. Chen, Donald Fallon, John T. Wang, Guiqing Genome Announc Viruses Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016. American Society for Microbiology 2016-12-15 /pmc/articles/PMC5159578/ /pubmed/27979945 http://dx.doi.org/10.1128/genomeA.01394-16 Text en Copyright © 2016 Huang et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Viruses
Huang, Weihua
Yin, Changhong
Zhuge, Jian
Farooq, Taliya
Yoon, Esther C.
Nolan, Sheila M.
Chen, Donald
Fallon, John T.
Wang, Guiqing
Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title_full Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title_fullStr Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title_full_unstemmed Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title_short Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016
title_sort complete genome sequences of nine enterovirus d68 strains from patients of the lower hudson valley, new york, 2016
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159578/
https://www.ncbi.nlm.nih.gov/pubmed/27979945
http://dx.doi.org/10.1128/genomeA.01394-16
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