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Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles

Involvement of single‐nucleotide polymorphism (SNP) genotyping in healthcare should allow for more effective use of pharmacogenomics. However, user‐friendly assays without the requirement of a special instrument still remain unavailable. This study describes naked‐eye SNP discrimination in exon 5 of...

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Autores principales: Akiyama, Yoshitsugu, Wang, Guoqing, Shiraishi, Shota, Kanayama, Naoki, Takarada, Tohru, Maeda, Mizuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5167314/
https://www.ncbi.nlm.nih.gov/pubmed/28032016
http://dx.doi.org/10.1002/open.201600110
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author Akiyama, Yoshitsugu
Wang, Guoqing
Shiraishi, Shota
Kanayama, Naoki
Takarada, Tohru
Maeda, Mizuo
author_facet Akiyama, Yoshitsugu
Wang, Guoqing
Shiraishi, Shota
Kanayama, Naoki
Takarada, Tohru
Maeda, Mizuo
author_sort Akiyama, Yoshitsugu
collection PubMed
description Involvement of single‐nucleotide polymorphism (SNP) genotyping in healthcare should allow for more effective use of pharmacogenomics. However, user‐friendly assays without the requirement of a special instrument still remain unavailable. This study describes naked‐eye SNP discrimination in exon 5 of the human cytochrome P450 2C19 monooxygenase gene, CYP2C19*1 (the wild‐type allele) and CYP2C19*2 (the variant allele with G681A point mutation). The present assay is composed of allele‐specific single‐base primer extension and salt‐induced aggregation of DNA‐modified gold nanoparticles (DNA–AuNPs). Genetic samples extracted from human hair roots are subjected to this assay. The results are verified by direct sequencing. This study should promise the prospective use of DNA–AuNPs in gene diagnosis.
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spelling pubmed-51673142016-12-28 Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles Akiyama, Yoshitsugu Wang, Guoqing Shiraishi, Shota Kanayama, Naoki Takarada, Tohru Maeda, Mizuo ChemistryOpen Communications Involvement of single‐nucleotide polymorphism (SNP) genotyping in healthcare should allow for more effective use of pharmacogenomics. However, user‐friendly assays without the requirement of a special instrument still remain unavailable. This study describes naked‐eye SNP discrimination in exon 5 of the human cytochrome P450 2C19 monooxygenase gene, CYP2C19*1 (the wild‐type allele) and CYP2C19*2 (the variant allele with G681A point mutation). The present assay is composed of allele‐specific single‐base primer extension and salt‐induced aggregation of DNA‐modified gold nanoparticles (DNA–AuNPs). Genetic samples extracted from human hair roots are subjected to this assay. The results are verified by direct sequencing. This study should promise the prospective use of DNA–AuNPs in gene diagnosis. John Wiley and Sons Inc. 2016-11-23 /pmc/articles/PMC5167314/ /pubmed/28032016 http://dx.doi.org/10.1002/open.201600110 Text en © 2016 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Communications
Akiyama, Yoshitsugu
Wang, Guoqing
Shiraishi, Shota
Kanayama, Naoki
Takarada, Tohru
Maeda, Mizuo
Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title_full Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title_fullStr Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title_full_unstemmed Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title_short Rapid Naked‐Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non‐Crosslinking Aggregation of DNA‐Functionalized Gold Nanoparticles
title_sort rapid naked‐eye discrimination of cytochrome p450 genetic polymorphism through non‐crosslinking aggregation of dna‐functionalized gold nanoparticles
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5167314/
https://www.ncbi.nlm.nih.gov/pubmed/28032016
http://dx.doi.org/10.1002/open.201600110
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