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Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge
Actinoalloteichus hymeniacidonis HPA 177(T) is a Gram-positive, strictly aerobic, black pigment producing and spore-forming actinomycete, which forms branching vegetative hyphae and was isolated from the marine sponge Hymeniacidon perlevis. Actinomycete bacteria are prolific producers of secondary m...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5168871/ https://www.ncbi.nlm.nih.gov/pubmed/28031775 http://dx.doi.org/10.1186/s40793-016-0213-3 |
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author | Schaffert, Lena Albersmeier, Andreas Winkler, Anika Kalinowski, Jörn Zotchev, Sergey B. Rückert, Christian |
author_facet | Schaffert, Lena Albersmeier, Andreas Winkler, Anika Kalinowski, Jörn Zotchev, Sergey B. Rückert, Christian |
author_sort | Schaffert, Lena |
collection | PubMed |
description | Actinoalloteichus hymeniacidonis HPA 177(T) is a Gram-positive, strictly aerobic, black pigment producing and spore-forming actinomycete, which forms branching vegetative hyphae and was isolated from the marine sponge Hymeniacidon perlevis. Actinomycete bacteria are prolific producers of secondary metabolites, some of which have been developed into anti-microbial, anti-tumor and immunosuppressive drugs currently used in human therapy. Considering this and the growing interest in natural products as sources of new drugs, actinomycete bacteria from the hitherto poorly explored marine environments may represent promising sources for drug discovery. As A. hymeniacidonis, isolated from the marine sponge, is a type strain of the recently described and rare genus Actinoalloteichus, knowledge of the complete genome sequence enables genome analyses to identify genetic loci for novel bioactive compounds. This project, describing the 6.31 Mbp long chromosome, with its 5346 protein-coding and 73 RNA genes, will aid the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Online Article Text |
id | pubmed-5168871 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-51688712016-12-28 Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge Schaffert, Lena Albersmeier, Andreas Winkler, Anika Kalinowski, Jörn Zotchev, Sergey B. Rückert, Christian Stand Genomic Sci Short Genome Report Actinoalloteichus hymeniacidonis HPA 177(T) is a Gram-positive, strictly aerobic, black pigment producing and spore-forming actinomycete, which forms branching vegetative hyphae and was isolated from the marine sponge Hymeniacidon perlevis. Actinomycete bacteria are prolific producers of secondary metabolites, some of which have been developed into anti-microbial, anti-tumor and immunosuppressive drugs currently used in human therapy. Considering this and the growing interest in natural products as sources of new drugs, actinomycete bacteria from the hitherto poorly explored marine environments may represent promising sources for drug discovery. As A. hymeniacidonis, isolated from the marine sponge, is a type strain of the recently described and rare genus Actinoalloteichus, knowledge of the complete genome sequence enables genome analyses to identify genetic loci for novel bioactive compounds. This project, describing the 6.31 Mbp long chromosome, with its 5346 protein-coding and 73 RNA genes, will aid the Genomic Encyclopedia of Bacteria and Archaea project. BioMed Central 2016-12-20 /pmc/articles/PMC5168871/ /pubmed/28031775 http://dx.doi.org/10.1186/s40793-016-0213-3 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Schaffert, Lena Albersmeier, Andreas Winkler, Anika Kalinowski, Jörn Zotchev, Sergey B. Rückert, Christian Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title | Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title_full | Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title_fullStr | Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title_full_unstemmed | Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title_short | Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177(T) isolated from a marine sponge |
title_sort | complete genome sequence of the actinomycete actinoalloteichus hymeniacidonis type strain hpa 177(t) isolated from a marine sponge |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5168871/ https://www.ncbi.nlm.nih.gov/pubmed/28031775 http://dx.doi.org/10.1186/s40793-016-0213-3 |
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