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Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese

Nine short tandem repeat (STR) markers (D3S1358, VWA, FGA, THO1, TPOX, CSFIPO, D5S818, D13S317, and D7S820) and a sex-identification marker (Amelogenin locus) were amplified with multiplex PCR and were genotyped with a four-color fluorescence method in samples from 174 unrelated Han individuals in N...

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Autores principales: Li, Shuangding, Yan, Chunxia, Deng, Yajun, Wang, Ruilin, Wang, Jian, Yang, Huanming, Li, Shengbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172406/
https://www.ncbi.nlm.nih.gov/pubmed/15626346
http://dx.doi.org/10.1016/S1672-0229(03)01020-9
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author Li, Shuangding
Yan, Chunxia
Deng, Yajun
Wang, Ruilin
Wang, Jian
Yang, Huanming
Li, Shengbin
author_facet Li, Shuangding
Yan, Chunxia
Deng, Yajun
Wang, Ruilin
Wang, Jian
Yang, Huanming
Li, Shengbin
author_sort Li, Shuangding
collection PubMed
description Nine short tandem repeat (STR) markers (D3S1358, VWA, FGA, THO1, TPOX, CSFIPO, D5S818, D13S317, and D7S820) and a sex-identification marker (Amelogenin locus) were amplified with multiplex PCR and were genotyped with a four-color fluorescence method in samples from 174 unrelated Han individuals in North China. The allele frequencies, genotype frequencies, heterozygosity, probability of discrimination powers, probability of paternity exclusion and Hardy-Weinberg equilibrium expectations were determined. The results demonstrated that the genotypes at all these STR loci in Han population conform to Hardy-Weinberg equilibrium expectations. The combined discrimination power (DP) was 1.05×10(−10) within nine STR loci analyzed and the probability of paternity exclusion (EPP) was 0.9998. The results indicate that these nine STR loci and the Amelogenin locus are useful markers for human identification, paternity and maternity testing and sex determination in forensic sciences.
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spelling pubmed-51724062016-12-23 Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese Li, Shuangding Yan, Chunxia Deng, Yajun Wang, Ruilin Wang, Jian Yang, Huanming Li, Shengbin Genomics Proteomics Bioinformatics Letter Nine short tandem repeat (STR) markers (D3S1358, VWA, FGA, THO1, TPOX, CSFIPO, D5S818, D13S317, and D7S820) and a sex-identification marker (Amelogenin locus) were amplified with multiplex PCR and were genotyped with a four-color fluorescence method in samples from 174 unrelated Han individuals in North China. The allele frequencies, genotype frequencies, heterozygosity, probability of discrimination powers, probability of paternity exclusion and Hardy-Weinberg equilibrium expectations were determined. The results demonstrated that the genotypes at all these STR loci in Han population conform to Hardy-Weinberg equilibrium expectations. The combined discrimination power (DP) was 1.05×10(−10) within nine STR loci analyzed and the probability of paternity exclusion (EPP) was 0.9998. The results indicate that these nine STR loci and the Amelogenin locus are useful markers for human identification, paternity and maternity testing and sex determination in forensic sciences. Elsevier 2003-05 2016-11-28 /pmc/articles/PMC5172406/ /pubmed/15626346 http://dx.doi.org/10.1016/S1672-0229(03)01020-9 Text en . http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Letter
Li, Shuangding
Yan, Chunxia
Deng, Yajun
Wang, Ruilin
Wang, Jian
Yang, Huanming
Li, Shengbin
Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title_full Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title_fullStr Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title_full_unstemmed Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title_short Polymorphism Profile of Nine Short Tandem Repeat Loci in the Han Chinese
title_sort polymorphism profile of nine short tandem repeat loci in the han chinese
topic Letter
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172406/
https://www.ncbi.nlm.nih.gov/pubmed/15626346
http://dx.doi.org/10.1016/S1672-0229(03)01020-9
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