Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba

To obtain a primary overview of gene diversity and expression pattern in Lycoris longituba, 4,992 ESTs (Expressed Sequence Tags) from L. longituba bud were sequenced and 4,687 cleaned ESTs were used for gene expression analysis. Clustered by the PHRAP program, 967 contigs and 1,343 singlets were obt...

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Detalles Bibliográficos
Autores principales: Cui, Yonglan, Zhang, Xinye, Zhou, Yan, Yu, Hong, Tao, Lin, Zhang, Lu, Zhou, Jian, Zhuge, Qiang, Cai, Youming, Huang, Minren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2004
Materias:
Letter
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172430/
https://www.ncbi.nlm.nih.gov/pubmed/15629042
http://dx.doi.org/10.1016/S1672-0229(04)02006-6
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author Cui, Yonglan
Zhang, Xinye
Zhou, Yan
Yu, Hong
Tao, Lin
Zhang, Lu
Zhou, Jian
Zhuge, Qiang
Cai, Youming
Huang, Minren
author_facet Cui, Yonglan
Zhang, Xinye
Zhou, Yan
Yu, Hong
Tao, Lin
Zhang, Lu
Zhou, Jian
Zhuge, Qiang
Cai, Youming
Huang, Minren
author_sort Cui, Yonglan
collection PubMed
description To obtain a primary overview of gene diversity and expression pattern in Lycoris longituba, 4,992 ESTs (Expressed Sequence Tags) from L. longituba bud were sequenced and 4,687 cleaned ESTs were used for gene expression analysis. Clustered by the PHRAP program, 967 contigs and 1,343 singlets were obtained. Blast search showed that 179 contigs and 227 singlets (totally 1,066 ESTs) had homologues in GenBank and 3,621 ESTs were novel.
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spelling pubmed-51724302016-12-23 Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba Cui, Yonglan Zhang, Xinye Zhou, Yan Yu, Hong Tao, Lin Zhang, Lu Zhou, Jian Zhuge, Qiang Cai, Youming Huang, Minren Genomics Proteomics Bioinformatics Letter To obtain a primary overview of gene diversity and expression pattern in Lycoris longituba, 4,992 ESTs (Expressed Sequence Tags) from L. longituba bud were sequenced and 4,687 cleaned ESTs were used for gene expression analysis. Clustered by the PHRAP program, 967 contigs and 1,343 singlets were obtained. Blast search showed that 179 contigs and 227 singlets (totally 1,066 ESTs) had homologues in GenBank and 3,621 ESTs were novel. Elsevier 2004-02 2016-11-28 /pmc/articles/PMC5172430/ /pubmed/15629042 http://dx.doi.org/10.1016/S1672-0229(04)02006-6 Text en . http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Letter
Cui, Yonglan
Zhang, Xinye
Zhou, Yan
Yu, Hong
Tao, Lin
Zhang, Lu
Zhou, Jian
Zhuge, Qiang
Cai, Youming
Huang, Minren
Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title_full Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title_fullStr Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title_full_unstemmed Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title_short Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba
title_sort identification and expression analysis of est-based genes in the bud of lycoris longituba
topic Letter
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172430/
https://www.ncbi.nlm.nih.gov/pubmed/15629042
http://dx.doi.org/10.1016/S1672-0229(04)02006-6
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