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The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma

In our previous studies, DAZAP2 gene expression was down-regulated in untreated patients of multiple myeloma (MM). For better studying the structure and function of DAZAP2, a full-length cDNA was isolated from mononuclear cells of a normal human bone marrow, sequenced and deposited to Genbank (AY430...

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Autores principales: Shi, Yiwu, Luo, Saiqun, Peng, Jianbin, Huang, Chenghan, Tan, Daren, Hu, Weixin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2004
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172432/
https://www.ncbi.nlm.nih.gov/pubmed/15629043
http://dx.doi.org/10.1016/S1672-0229(04)02007-8
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author Shi, Yiwu
Luo, Saiqun
Peng, Jianbin
Huang, Chenghan
Tan, Daren
Hu, Weixin
author_facet Shi, Yiwu
Luo, Saiqun
Peng, Jianbin
Huang, Chenghan
Tan, Daren
Hu, Weixin
author_sort Shi, Yiwu
collection PubMed
description In our previous studies, DAZAP2 gene expression was down-regulated in untreated patients of multiple myeloma (MM). For better studying the structure and function of DAZAP2, a full-length cDNA was isolated from mononuclear cells of a normal human bone marrow, sequenced and deposited to Genbank (AY430097). This sequence has an identical ORF (open reading frame) as the NM_014764 from human testis and the D31767 from human cell line KG-1. Phylogenetic analysis and structure prediction reveal that DAZAP2 homologues are highly conserved throughout evolution and share a polyproline region and several potential SH2/SH3 binding sites. DAZAP2 occurs as a single-copy gene with a four-exon organization. We further noticed that the functional DAZAP2 gene is located on Chromosome 12 and its pseudogene gene is on Chromosome 2 with electronic location of human chromosome in Genbank, though no genetic abnormalities of MM have been reported on Chromosome 12. The ORF of human DAZAP2 encodes a 17-kDa protein, which is highly similar to mouse Prtb. The DAZAP2 protein is mainly localized in cytoplasm with a discrete pattern of punctuated distribution. DAZAP2 may associate with carcinogenesis of MM and participate in yet-to-be identified signaling pathways to regulate proliferation and differentiation of plasma cells.
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spelling pubmed-51724322016-12-23 The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma Shi, Yiwu Luo, Saiqun Peng, Jianbin Huang, Chenghan Tan, Daren Hu, Weixin Genomics Proteomics Bioinformatics Letter In our previous studies, DAZAP2 gene expression was down-regulated in untreated patients of multiple myeloma (MM). For better studying the structure and function of DAZAP2, a full-length cDNA was isolated from mononuclear cells of a normal human bone marrow, sequenced and deposited to Genbank (AY430097). This sequence has an identical ORF (open reading frame) as the NM_014764 from human testis and the D31767 from human cell line KG-1. Phylogenetic analysis and structure prediction reveal that DAZAP2 homologues are highly conserved throughout evolution and share a polyproline region and several potential SH2/SH3 binding sites. DAZAP2 occurs as a single-copy gene with a four-exon organization. We further noticed that the functional DAZAP2 gene is located on Chromosome 12 and its pseudogene gene is on Chromosome 2 with electronic location of human chromosome in Genbank, though no genetic abnormalities of MM have been reported on Chromosome 12. The ORF of human DAZAP2 encodes a 17-kDa protein, which is highly similar to mouse Prtb. The DAZAP2 protein is mainly localized in cytoplasm with a discrete pattern of punctuated distribution. DAZAP2 may associate with carcinogenesis of MM and participate in yet-to-be identified signaling pathways to regulate proliferation and differentiation of plasma cells. Elsevier 2004-02 2016-11-28 /pmc/articles/PMC5172432/ /pubmed/15629043 http://dx.doi.org/10.1016/S1672-0229(04)02007-8 Text en . http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Letter
Shi, Yiwu
Luo, Saiqun
Peng, Jianbin
Huang, Chenghan
Tan, Daren
Hu, Weixin
The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title_full The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title_fullStr The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title_full_unstemmed The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title_short The Structure, Expression, and Function Prediction of DAZAP2, A Down-Regulated Gene in Multiple Myeloma
title_sort structure, expression, and function prediction of dazap2, a down-regulated gene in multiple myeloma
topic Letter
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172432/
https://www.ncbi.nlm.nih.gov/pubmed/15629043
http://dx.doi.org/10.1016/S1672-0229(04)02007-8
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