Cargando…
Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration
The mammalian liver has a very strong regeneration capacity after partial hepatectomy (PH). To further learn the genes participating in the liver regeneration (LR), 551 cDNAs selected from subtracted cDNA libraries of the regenerating rat liver were screened by microarray, and their expression profi...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2004
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172454/ https://www.ncbi.nlm.nih.gov/pubmed/15629050 http://dx.doi.org/10.1016/S1672-0229(04)02016-9 |
_version_ | 1782484132346986496 |
---|---|
author | Xu, Cunshuan Chang, Cuifang Yuan, Jinyun Han, Hongpeng Yang, Kejin Zhao, Lifeng Li, Wenqiang Li, Yuchang Zhang, Huiyong Rahman, Salman Zhang, Jingbo |
author_facet | Xu, Cunshuan Chang, Cuifang Yuan, Jinyun Han, Hongpeng Yang, Kejin Zhao, Lifeng Li, Wenqiang Li, Yuchang Zhang, Huiyong Rahman, Salman Zhang, Jingbo |
author_sort | Xu, Cunshuan |
collection | PubMed |
description | The mammalian liver has a very strong regeneration capacity after partial hepatectomy (PH). To further learn the genes participating in the liver regeneration (LR), 551 cDNAs selected from subtracted cDNA libraries of the regenerating rat liver were screened by microarray, and their expression profiles were studied by cluster and generalization analyses. Among them, 177 genes were identified unreported and up- or down-regulated more than twofold at one or more time points after PH, of which 62 genes were down-regulated to less than 0.5; 99 genes were up-regulated to 2–10 folds, and 16 genes were either up- or down-regulated at different time points during LR. By using BLAST and GENSCAN, these genes were located on responsible chromosomes with 131 genes on the long arms of the chromosomes. The cluster and generalization analyses showed that the gene expression profiles are similar in 2 and 4, 12 and 16, 96 and 144 h respectively after PH, suggesting that the actions of the genes expressed in the same profiles are similar, and those expressed in different profiles have less similarity. However, the types, characteristics and functions of the 177 genes remain to be further studied. |
format | Online Article Text |
id | pubmed-5172454 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2004 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-51724542016-12-23 Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration Xu, Cunshuan Chang, Cuifang Yuan, Jinyun Han, Hongpeng Yang, Kejin Zhao, Lifeng Li, Wenqiang Li, Yuchang Zhang, Huiyong Rahman, Salman Zhang, Jingbo Genomics Proteomics Bioinformatics Letter The mammalian liver has a very strong regeneration capacity after partial hepatectomy (PH). To further learn the genes participating in the liver regeneration (LR), 551 cDNAs selected from subtracted cDNA libraries of the regenerating rat liver were screened by microarray, and their expression profiles were studied by cluster and generalization analyses. Among them, 177 genes were identified unreported and up- or down-regulated more than twofold at one or more time points after PH, of which 62 genes were down-regulated to less than 0.5; 99 genes were up-regulated to 2–10 folds, and 16 genes were either up- or down-regulated at different time points during LR. By using BLAST and GENSCAN, these genes were located on responsible chromosomes with 131 genes on the long arms of the chromosomes. The cluster and generalization analyses showed that the gene expression profiles are similar in 2 and 4, 12 and 16, 96 and 144 h respectively after PH, suggesting that the actions of the genes expressed in the same profiles are similar, and those expressed in different profiles have less similarity. However, the types, characteristics and functions of the 177 genes remain to be further studied. Elsevier 2004-05 2016-11-28 /pmc/articles/PMC5172454/ /pubmed/15629050 http://dx.doi.org/10.1016/S1672-0229(04)02016-9 Text en . http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Letter Xu, Cunshuan Chang, Cuifang Yuan, Jinyun Han, Hongpeng Yang, Kejin Zhao, Lifeng Li, Wenqiang Li, Yuchang Zhang, Huiyong Rahman, Salman Zhang, Jingbo Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title | Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title_full | Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title_fullStr | Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title_full_unstemmed | Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title_short | Identification and Characterization of 177 Unreported Genes Associated with Liver Regeneration |
title_sort | identification and characterization of 177 unreported genes associated with liver regeneration |
topic | Letter |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172454/ https://www.ncbi.nlm.nih.gov/pubmed/15629050 http://dx.doi.org/10.1016/S1672-0229(04)02016-9 |
work_keys_str_mv | AT xucunshuan identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT changcuifang identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT yuanjinyun identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT hanhongpeng identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT yangkejin identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT zhaolifeng identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT liwenqiang identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT liyuchang identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT zhanghuiyong identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT rahmansalman identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration AT zhangjingbo identificationandcharacterizationof177unreportedgenesassociatedwithliverregeneration |