A Comprehensive Software Suite for the Analysis of cDNAs

We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon...

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Detalles Bibliográficos
Autores principales: Arakawa, Kazuharu, Suzuki, Haruo, Fujishima, Kosuke, Fujimoto, Kenji, Ueda, Sho, Matsui, Motomu, Tomita, Masaru
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2005
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5172547/
https://www.ncbi.nlm.nih.gov/pubmed/16487083
http://dx.doi.org/10.1016/S1672-0229(05)03023-8
Descripción
Sumario:We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction. The software package is freely available under the GNU General Public License at http://www.g-language.org/data/cdna/.

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