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An Adaptation To Life In Acid Through A Novel Mevalonate Pathway

Extreme acidophiles are capable of growth at pH values near zero. Sustaining life in acidic environments requires extensive adaptations of membranes, proton pumps, and DNA repair mechanisms. Here we describe an adaptation of a core biochemical pathway, the mevalonate pathway, in extreme acidophiles....

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Autores principales: Vinokur, Jeffrey M., Cummins, Matthew C., Korman, Tyler P., Bowie, James U.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5177888/
https://www.ncbi.nlm.nih.gov/pubmed/28004831
http://dx.doi.org/10.1038/srep39737
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author Vinokur, Jeffrey M.
Cummins, Matthew C.
Korman, Tyler P.
Bowie, James U.
author_facet Vinokur, Jeffrey M.
Cummins, Matthew C.
Korman, Tyler P.
Bowie, James U.
author_sort Vinokur, Jeffrey M.
collection PubMed
description Extreme acidophiles are capable of growth at pH values near zero. Sustaining life in acidic environments requires extensive adaptations of membranes, proton pumps, and DNA repair mechanisms. Here we describe an adaptation of a core biochemical pathway, the mevalonate pathway, in extreme acidophiles. Two previously known mevalonate pathways involve ATP dependent decarboxylation of either mevalonate 5-phosphate or mevalonate 5-pyrophosphate, in which a single enzyme carries out two essential steps: (1) phosphorylation of the mevalonate moiety at the 3-OH position and (2) subsequent decarboxylation. We now demonstrate that in extreme acidophiles, decarboxylation is carried out by two separate steps: previously identified enzymes generate mevalonate 3,5-bisphosphate and a new decarboxylase we describe here, mevalonate 3,5-bisphosphate decarboxylase, produces isopentenyl phosphate. Why use two enzymes in acidophiles when one enzyme provides both functionalities in all other organisms examined to date? We find that at low pH, the dual function enzyme, mevalonate 5-phosphate decarboxylase is unable to carry out the first phosphorylation step, yet retains its ability to perform decarboxylation. We therefore propose that extreme acidophiles had to replace the dual-purpose enzyme with two specialized enzymes to efficiently produce isoprenoids in extremely acidic environments.
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spelling pubmed-51778882016-12-29 An Adaptation To Life In Acid Through A Novel Mevalonate Pathway Vinokur, Jeffrey M. Cummins, Matthew C. Korman, Tyler P. Bowie, James U. Sci Rep Article Extreme acidophiles are capable of growth at pH values near zero. Sustaining life in acidic environments requires extensive adaptations of membranes, proton pumps, and DNA repair mechanisms. Here we describe an adaptation of a core biochemical pathway, the mevalonate pathway, in extreme acidophiles. Two previously known mevalonate pathways involve ATP dependent decarboxylation of either mevalonate 5-phosphate or mevalonate 5-pyrophosphate, in which a single enzyme carries out two essential steps: (1) phosphorylation of the mevalonate moiety at the 3-OH position and (2) subsequent decarboxylation. We now demonstrate that in extreme acidophiles, decarboxylation is carried out by two separate steps: previously identified enzymes generate mevalonate 3,5-bisphosphate and a new decarboxylase we describe here, mevalonate 3,5-bisphosphate decarboxylase, produces isopentenyl phosphate. Why use two enzymes in acidophiles when one enzyme provides both functionalities in all other organisms examined to date? We find that at low pH, the dual function enzyme, mevalonate 5-phosphate decarboxylase is unable to carry out the first phosphorylation step, yet retains its ability to perform decarboxylation. We therefore propose that extreme acidophiles had to replace the dual-purpose enzyme with two specialized enzymes to efficiently produce isoprenoids in extremely acidic environments. Nature Publishing Group 2016-12-22 /pmc/articles/PMC5177888/ /pubmed/28004831 http://dx.doi.org/10.1038/srep39737 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Vinokur, Jeffrey M.
Cummins, Matthew C.
Korman, Tyler P.
Bowie, James U.
An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title_full An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title_fullStr An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title_full_unstemmed An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title_short An Adaptation To Life In Acid Through A Novel Mevalonate Pathway
title_sort adaptation to life in acid through a novel mevalonate pathway
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5177888/
https://www.ncbi.nlm.nih.gov/pubmed/28004831
http://dx.doi.org/10.1038/srep39737
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