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Structural enzymology using X-ray free electron lasers

Mix-and-inject serial crystallography (MISC) is a technique designed to image enzyme catalyzed reactions in which small protein crystals are mixed with a substrate just prior to being probed by an X-ray pulse. This approach offers several advantages over flow cell studies. It provides (i) room tempe...

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Autores principales: Kupitz, Christopher, Olmos, Jose L., Holl, Mark, Tremblay, Lee, Pande, Kanupriya, Pandey, Suraj, Oberthür, Dominik, Hunter, Mark, Liang, Mengning, Aquila, Andrew, Tenboer, Jason, Calvey, George, Katz, Andrea, Chen, Yujie, Wiedorn, Max O., Knoska, Juraj, Meents, Alke, Majriani, Valerio, Norwood, Tyler, Poudyal, Ishwor, Grant, Thomas, Miller, Mitchell D., Xu, Weijun, Tolstikova, Aleksandra, Morgan, Andrew, Metz, Markus, Martin-Garcia, Jose M., Zook, James D., Roy-Chowdhury, Shatabdi, Coe, Jesse, Nagaratnam, Nirupa, Meza, Domingo, Fromme, Raimund, Basu, Shibom, Frank, Matthias, White, Thomas, Barty, Anton, Bajt, Sasa, Yefanov, Oleksandr, Chapman, Henry N., Zatsepin, Nadia, Nelson, Garrett, Weierstall, Uwe, Spence, John, Schwander, Peter, Pollack, Lois, Fromme, Petra, Ourmazd, Abbas, Phillips, George N., Schmidt, Marius
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Crystallographic Association 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5178802/
https://www.ncbi.nlm.nih.gov/pubmed/28083542
http://dx.doi.org/10.1063/1.4972069
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author Kupitz, Christopher
Olmos, Jose L.
Holl, Mark
Tremblay, Lee
Pande, Kanupriya
Pandey, Suraj
Oberthür, Dominik
Hunter, Mark
Liang, Mengning
Aquila, Andrew
Tenboer, Jason
Calvey, George
Katz, Andrea
Chen, Yujie
Wiedorn, Max O.
Knoska, Juraj
Meents, Alke
Majriani, Valerio
Norwood, Tyler
Poudyal, Ishwor
Grant, Thomas
Miller, Mitchell D.
Xu, Weijun
Tolstikova, Aleksandra
Morgan, Andrew
Metz, Markus
Martin-Garcia, Jose M.
Zook, James D.
Roy-Chowdhury, Shatabdi
Coe, Jesse
Nagaratnam, Nirupa
Meza, Domingo
Fromme, Raimund
Basu, Shibom
Frank, Matthias
White, Thomas
Barty, Anton
Bajt, Sasa
Yefanov, Oleksandr
Chapman, Henry N.
Zatsepin, Nadia
Nelson, Garrett
Weierstall, Uwe
Spence, John
Schwander, Peter
Pollack, Lois
Fromme, Petra
Ourmazd, Abbas
Phillips, George N.
Schmidt, Marius
author_facet Kupitz, Christopher
Olmos, Jose L.
Holl, Mark
Tremblay, Lee
Pande, Kanupriya
Pandey, Suraj
Oberthür, Dominik
Hunter, Mark
Liang, Mengning
Aquila, Andrew
Tenboer, Jason
Calvey, George
Katz, Andrea
Chen, Yujie
Wiedorn, Max O.
Knoska, Juraj
Meents, Alke
Majriani, Valerio
Norwood, Tyler
Poudyal, Ishwor
Grant, Thomas
Miller, Mitchell D.
Xu, Weijun
Tolstikova, Aleksandra
Morgan, Andrew
Metz, Markus
Martin-Garcia, Jose M.
Zook, James D.
Roy-Chowdhury, Shatabdi
Coe, Jesse
Nagaratnam, Nirupa
Meza, Domingo
Fromme, Raimund
Basu, Shibom
Frank, Matthias
White, Thomas
Barty, Anton
Bajt, Sasa
Yefanov, Oleksandr
Chapman, Henry N.
Zatsepin, Nadia
Nelson, Garrett
Weierstall, Uwe
Spence, John
Schwander, Peter
Pollack, Lois
Fromme, Petra
Ourmazd, Abbas
Phillips, George N.
Schmidt, Marius
author_sort Kupitz, Christopher
collection PubMed
description Mix-and-inject serial crystallography (MISC) is a technique designed to image enzyme catalyzed reactions in which small protein crystals are mixed with a substrate just prior to being probed by an X-ray pulse. This approach offers several advantages over flow cell studies. It provides (i) room temperature structures at near atomic resolution, (ii) time resolution ranging from microseconds to seconds, and (iii) convenient reaction initiation. It outruns radiation damage by using femtosecond X-ray pulses allowing damage and chemistry to be separated. Here, we demonstrate that MISC is feasible at an X-ray free electron laser by studying the reaction of M. tuberculosis ß-lactamase microcrystals with ceftriaxone antibiotic solution. Electron density maps of the apo-ß-lactamase and of the ceftriaxone bound form were obtained at 2.8 Å and 2.4 Å resolution, respectively. These results pave the way to study cyclic and non-cyclic reactions and represent a new field of time-resolved structural dynamics for numerous substrate-triggered biological reactions.
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spelling pubmed-51788022017-01-12 Structural enzymology using X-ray free electron lasers Kupitz, Christopher Olmos, Jose L. Holl, Mark Tremblay, Lee Pande, Kanupriya Pandey, Suraj Oberthür, Dominik Hunter, Mark Liang, Mengning Aquila, Andrew Tenboer, Jason Calvey, George Katz, Andrea Chen, Yujie Wiedorn, Max O. Knoska, Juraj Meents, Alke Majriani, Valerio Norwood, Tyler Poudyal, Ishwor Grant, Thomas Miller, Mitchell D. Xu, Weijun Tolstikova, Aleksandra Morgan, Andrew Metz, Markus Martin-Garcia, Jose M. Zook, James D. Roy-Chowdhury, Shatabdi Coe, Jesse Nagaratnam, Nirupa Meza, Domingo Fromme, Raimund Basu, Shibom Frank, Matthias White, Thomas Barty, Anton Bajt, Sasa Yefanov, Oleksandr Chapman, Henry N. Zatsepin, Nadia Nelson, Garrett Weierstall, Uwe Spence, John Schwander, Peter Pollack, Lois Fromme, Petra Ourmazd, Abbas Phillips, George N. Schmidt, Marius Struct Dyn Ultrafast Structural Dynamics—A Tribute to Ahmed H. Zewail Mix-and-inject serial crystallography (MISC) is a technique designed to image enzyme catalyzed reactions in which small protein crystals are mixed with a substrate just prior to being probed by an X-ray pulse. This approach offers several advantages over flow cell studies. It provides (i) room temperature structures at near atomic resolution, (ii) time resolution ranging from microseconds to seconds, and (iii) convenient reaction initiation. It outruns radiation damage by using femtosecond X-ray pulses allowing damage and chemistry to be separated. Here, we demonstrate that MISC is feasible at an X-ray free electron laser by studying the reaction of M. tuberculosis ß-lactamase microcrystals with ceftriaxone antibiotic solution. Electron density maps of the apo-ß-lactamase and of the ceftriaxone bound form were obtained at 2.8 Å and 2.4 Å resolution, respectively. These results pave the way to study cyclic and non-cyclic reactions and represent a new field of time-resolved structural dynamics for numerous substrate-triggered biological reactions. American Crystallographic Association 2016-12-15 /pmc/articles/PMC5178802/ /pubmed/28083542 http://dx.doi.org/10.1063/1.4972069 Text en © 2016 Author(s). 2329-7778/2017/4(4)/044003/7 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Ultrafast Structural Dynamics—A Tribute to Ahmed H. Zewail
Kupitz, Christopher
Olmos, Jose L.
Holl, Mark
Tremblay, Lee
Pande, Kanupriya
Pandey, Suraj
Oberthür, Dominik
Hunter, Mark
Liang, Mengning
Aquila, Andrew
Tenboer, Jason
Calvey, George
Katz, Andrea
Chen, Yujie
Wiedorn, Max O.
Knoska, Juraj
Meents, Alke
Majriani, Valerio
Norwood, Tyler
Poudyal, Ishwor
Grant, Thomas
Miller, Mitchell D.
Xu, Weijun
Tolstikova, Aleksandra
Morgan, Andrew
Metz, Markus
Martin-Garcia, Jose M.
Zook, James D.
Roy-Chowdhury, Shatabdi
Coe, Jesse
Nagaratnam, Nirupa
Meza, Domingo
Fromme, Raimund
Basu, Shibom
Frank, Matthias
White, Thomas
Barty, Anton
Bajt, Sasa
Yefanov, Oleksandr
Chapman, Henry N.
Zatsepin, Nadia
Nelson, Garrett
Weierstall, Uwe
Spence, John
Schwander, Peter
Pollack, Lois
Fromme, Petra
Ourmazd, Abbas
Phillips, George N.
Schmidt, Marius
Structural enzymology using X-ray free electron lasers
title Structural enzymology using X-ray free electron lasers
title_full Structural enzymology using X-ray free electron lasers
title_fullStr Structural enzymology using X-ray free electron lasers
title_full_unstemmed Structural enzymology using X-ray free electron lasers
title_short Structural enzymology using X-ray free electron lasers
title_sort structural enzymology using x-ray free electron lasers
topic Ultrafast Structural Dynamics—A Tribute to Ahmed H. Zewail
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5178802/
https://www.ncbi.nlm.nih.gov/pubmed/28083542
http://dx.doi.org/10.1063/1.4972069
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