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Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants

BACKGROUND: DNA extraction methods for PCR-quality DNA from calluses and plants are not time efficient, since they require that the tissues be ground in liquid nitrogen, followed by precipitation of the DNA pellet in ethanol, washing and drying the pellet, etc. The need for a rapid and simple proced...

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Detalles Bibliográficos
Autores principales: Kang, Tae-Jin, Yang, Moon-Sik
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2004
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC517939/
https://www.ncbi.nlm.nih.gov/pubmed/15341663
http://dx.doi.org/10.1186/1472-6750-4-20
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author Kang, Tae-Jin
Yang, Moon-Sik
author_facet Kang, Tae-Jin
Yang, Moon-Sik
author_sort Kang, Tae-Jin
collection PubMed
description BACKGROUND: DNA extraction methods for PCR-quality DNA from calluses and plants are not time efficient, since they require that the tissues be ground in liquid nitrogen, followed by precipitation of the DNA pellet in ethanol, washing and drying the pellet, etc. The need for a rapid and simple procedure is urgent, especially when hundreds of samples need to be analyzed. Here, we describe a simple and efficient method of isolating high-quality genomic DNA for PCR amplification and enzyme digestion from calluses, various wild-type and transgenic plants. RESULTS: We developed new rapid and reliable genomic DNA extraction method. With our developed method, plant genomic DNA extraction could be performed within 30 min. The method was as follows. Plant tissue was homogenized with salt DNA extraction buffer using hand-operated homogenizer and extracted by phenol:chloroform:isoamyl alcohol (25:24:1). After centrifugation, the supernatant was directly used for DNA template for PCR, resulting in successful amplification for RAPD from various sources of plants and specific foreign genes from transgenic plants. After precipitating the supernatant, the DNA was completely digested by restriction enzymes. CONCLUSION: This DNA extraction procedure promises simplicity, speed, and efficiency, both in terms of time and the amount of plant sample required. In addition, this method does not require expensive facilities for plant genomic DNA extraction.
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spelling pubmed-5179392004-09-24 Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants Kang, Tae-Jin Yang, Moon-Sik BMC Biotechnol Methodology Article BACKGROUND: DNA extraction methods for PCR-quality DNA from calluses and plants are not time efficient, since they require that the tissues be ground in liquid nitrogen, followed by precipitation of the DNA pellet in ethanol, washing and drying the pellet, etc. The need for a rapid and simple procedure is urgent, especially when hundreds of samples need to be analyzed. Here, we describe a simple and efficient method of isolating high-quality genomic DNA for PCR amplification and enzyme digestion from calluses, various wild-type and transgenic plants. RESULTS: We developed new rapid and reliable genomic DNA extraction method. With our developed method, plant genomic DNA extraction could be performed within 30 min. The method was as follows. Plant tissue was homogenized with salt DNA extraction buffer using hand-operated homogenizer and extracted by phenol:chloroform:isoamyl alcohol (25:24:1). After centrifugation, the supernatant was directly used for DNA template for PCR, resulting in successful amplification for RAPD from various sources of plants and specific foreign genes from transgenic plants. After precipitating the supernatant, the DNA was completely digested by restriction enzymes. CONCLUSION: This DNA extraction procedure promises simplicity, speed, and efficiency, both in terms of time and the amount of plant sample required. In addition, this method does not require expensive facilities for plant genomic DNA extraction. BioMed Central 2004-09-02 /pmc/articles/PMC517939/ /pubmed/15341663 http://dx.doi.org/10.1186/1472-6750-4-20 Text en Copyright © 2004 Kang and Yang; licensee BioMed Central Ltd.
spellingShingle Methodology Article
Kang, Tae-Jin
Yang, Moon-Sik
Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title_full Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title_fullStr Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title_full_unstemmed Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title_short Rapid and reliable extraction of genomic DNA from various wild-type and transgenic plants
title_sort rapid and reliable extraction of genomic dna from various wild-type and transgenic plants
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC517939/
https://www.ncbi.nlm.nih.gov/pubmed/15341663
http://dx.doi.org/10.1186/1472-6750-4-20
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