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Cycle and flow trusses in directed networks
When we represent real-world systems as networks, the directions of links often convey valuable information. Finding module structures that respect link directions is one of the most important tasks for analysing directed networks. Although many notions of a directed module have been proposed, no co...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180108/ https://www.ncbi.nlm.nih.gov/pubmed/28018610 http://dx.doi.org/10.1098/rsos.160270 |
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author | Takaguchi, Taro Yoshida, Yuichi |
author_facet | Takaguchi, Taro Yoshida, Yuichi |
author_sort | Takaguchi, Taro |
collection | PubMed |
description | When we represent real-world systems as networks, the directions of links often convey valuable information. Finding module structures that respect link directions is one of the most important tasks for analysing directed networks. Although many notions of a directed module have been proposed, no consensus has been reached. This lack of consensus results partly because there might exist distinct types of modules in a single directed network, whereas most previous studies focused on an independent criterion for modules. To address this issue, we propose a generic notion of the so-called truss structures in directed networks. Our definition of truss is able to extract two distinct types of trusses, named the cycle truss and the flow truss, from a unified framework. By applying the method for finding trusses to empirical networks obtained from a wide range of research fields, we find that most real networks contain both cycle and flow trusses. In addition, the abundance of (and the overlap between) the two types of trusses may be useful to characterize module structures in a wide variety of empirical networks. Our findings shed light on the importance of simultaneously considering different types of modules in directed networks. |
format | Online Article Text |
id | pubmed-5180108 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-51801082016-12-23 Cycle and flow trusses in directed networks Takaguchi, Taro Yoshida, Yuichi R Soc Open Sci Physics When we represent real-world systems as networks, the directions of links often convey valuable information. Finding module structures that respect link directions is one of the most important tasks for analysing directed networks. Although many notions of a directed module have been proposed, no consensus has been reached. This lack of consensus results partly because there might exist distinct types of modules in a single directed network, whereas most previous studies focused on an independent criterion for modules. To address this issue, we propose a generic notion of the so-called truss structures in directed networks. Our definition of truss is able to extract two distinct types of trusses, named the cycle truss and the flow truss, from a unified framework. By applying the method for finding trusses to empirical networks obtained from a wide range of research fields, we find that most real networks contain both cycle and flow trusses. In addition, the abundance of (and the overlap between) the two types of trusses may be useful to characterize module structures in a wide variety of empirical networks. Our findings shed light on the importance of simultaneously considering different types of modules in directed networks. The Royal Society Publishing 2016-11-30 /pmc/articles/PMC5180108/ /pubmed/28018610 http://dx.doi.org/10.1098/rsos.160270 Text en © 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Physics Takaguchi, Taro Yoshida, Yuichi Cycle and flow trusses in directed networks |
title | Cycle and flow trusses in directed networks |
title_full | Cycle and flow trusses in directed networks |
title_fullStr | Cycle and flow trusses in directed networks |
title_full_unstemmed | Cycle and flow trusses in directed networks |
title_short | Cycle and flow trusses in directed networks |
title_sort | cycle and flow trusses in directed networks |
topic | Physics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180108/ https://www.ncbi.nlm.nih.gov/pubmed/28018610 http://dx.doi.org/10.1098/rsos.160270 |
work_keys_str_mv | AT takaguchitaro cycleandflowtrussesindirectednetworks AT yoshidayuichi cycleandflowtrussesindirectednetworks |