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Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events
Detecting the existence of temporally coordinated spiking activity, and its role in information processing in the cortex, has remained a major challenge for neuroscience research. Different methods and approaches have been suggested to test whether the observed synchronized events are significantly...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180579/ https://www.ncbi.nlm.nih.gov/pubmed/28066225 http://dx.doi.org/10.3389/fncom.2016.00139 |
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author | Shahi, Mina van Vreeswijk, Carl Pipa, Gordon |
author_facet | Shahi, Mina van Vreeswijk, Carl Pipa, Gordon |
author_sort | Shahi, Mina |
collection | PubMed |
description | Detecting the existence of temporally coordinated spiking activity, and its role in information processing in the cortex, has remained a major challenge for neuroscience research. Different methods and approaches have been suggested to test whether the observed synchronized events are significantly different from those expected by chance. To analyze the simultaneous spike trains for precise spike correlation, these methods typically model the spike trains as a Poisson process implying that the generation of each spike is independent of all the other spikes. However, studies have shown that neural spike trains exhibit dependence among spike sequences, such as the absolute and relative refractory periods which govern the spike probability of the oncoming action potential based on the time of the last spike, or the bursting behavior, which is characterized by short epochs of rapid action potentials, followed by longer episodes of silence. Here we investigate non-renewal processes with the inter-spike interval distribution model that incorporates spike-history dependence of individual neurons. For that, we use the Monte Carlo method to estimate the full shape of the coincidence count distribution and to generate false positives for coincidence detection. The results show that compared to the distributions based on homogeneous Poisson processes, and also non-Poisson processes, the width of the distribution of joint spike events changes. Non-renewal processes can lead to both heavy tailed or narrow coincidence distribution. We conclude that small differences in the exact autostructure of the point process can cause large differences in the width of a coincidence distribution. Therefore, manipulations of the autostructure for the estimation of significance of joint spike events seem to be inadequate. |
format | Online Article Text |
id | pubmed-5180579 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-51805792017-01-06 Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events Shahi, Mina van Vreeswijk, Carl Pipa, Gordon Front Comput Neurosci Neuroscience Detecting the existence of temporally coordinated spiking activity, and its role in information processing in the cortex, has remained a major challenge for neuroscience research. Different methods and approaches have been suggested to test whether the observed synchronized events are significantly different from those expected by chance. To analyze the simultaneous spike trains for precise spike correlation, these methods typically model the spike trains as a Poisson process implying that the generation of each spike is independent of all the other spikes. However, studies have shown that neural spike trains exhibit dependence among spike sequences, such as the absolute and relative refractory periods which govern the spike probability of the oncoming action potential based on the time of the last spike, or the bursting behavior, which is characterized by short epochs of rapid action potentials, followed by longer episodes of silence. Here we investigate non-renewal processes with the inter-spike interval distribution model that incorporates spike-history dependence of individual neurons. For that, we use the Monte Carlo method to estimate the full shape of the coincidence count distribution and to generate false positives for coincidence detection. The results show that compared to the distributions based on homogeneous Poisson processes, and also non-Poisson processes, the width of the distribution of joint spike events changes. Non-renewal processes can lead to both heavy tailed or narrow coincidence distribution. We conclude that small differences in the exact autostructure of the point process can cause large differences in the width of a coincidence distribution. Therefore, manipulations of the autostructure for the estimation of significance of joint spike events seem to be inadequate. Frontiers Media S.A. 2016-12-23 /pmc/articles/PMC5180579/ /pubmed/28066225 http://dx.doi.org/10.3389/fncom.2016.00139 Text en Copyright © 2016 Shahi, van Vreeswijk and Pipa. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Shahi, Mina van Vreeswijk, Carl Pipa, Gordon Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title | Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title_full | Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title_fullStr | Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title_full_unstemmed | Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title_short | Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events |
title_sort | serial spike time correlations affect probability distribution of joint spike events |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180579/ https://www.ncbi.nlm.nih.gov/pubmed/28066225 http://dx.doi.org/10.3389/fncom.2016.00139 |
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