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Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment

We developed a bio-inspired robot controller combining an artificial genome with an agent-based control system. The genome encodes a gene regulatory network (GRN) that is switched on by environmental cues and, following the rules of transcriptional regulation, provides output signals to actuators. W...

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Detalles Bibliográficos
Autores principales: Yao, Yao, Storme, Veronique, Marchal, Kathleen, Van de Peer, Yves
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180581/
https://www.ncbi.nlm.nih.gov/pubmed/28028477
http://dx.doi.org/10.7717/peerj.2812
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author Yao, Yao
Storme, Veronique
Marchal, Kathleen
Van de Peer, Yves
author_facet Yao, Yao
Storme, Veronique
Marchal, Kathleen
Van de Peer, Yves
author_sort Yao, Yao
collection PubMed
description We developed a bio-inspired robot controller combining an artificial genome with an agent-based control system. The genome encodes a gene regulatory network (GRN) that is switched on by environmental cues and, following the rules of transcriptional regulation, provides output signals to actuators. Whereas the genome represents the full encoding of the transcriptional network, the agent-based system mimics the active regulatory network and signal transduction system also present in naturally occurring biological systems. Using such a design that separates the static from the conditionally active part of the gene regulatory network contributes to a better general adaptive behaviour. Here, we have explored the potential of our platform with respect to the evolution of adaptive behaviour, such as preying when food becomes scarce, in a complex and changing environment and show through simulations of swarm robots in an A-life environment that evolution of collective behaviour likely can be attributed to bio-inspired evolutionary processes acting at different levels, from the gene and the genome to the individual robot and robot population.
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spelling pubmed-51805812016-12-27 Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment Yao, Yao Storme, Veronique Marchal, Kathleen Van de Peer, Yves PeerJ Bioinformatics We developed a bio-inspired robot controller combining an artificial genome with an agent-based control system. The genome encodes a gene regulatory network (GRN) that is switched on by environmental cues and, following the rules of transcriptional regulation, provides output signals to actuators. Whereas the genome represents the full encoding of the transcriptional network, the agent-based system mimics the active regulatory network and signal transduction system also present in naturally occurring biological systems. Using such a design that separates the static from the conditionally active part of the gene regulatory network contributes to a better general adaptive behaviour. Here, we have explored the potential of our platform with respect to the evolution of adaptive behaviour, such as preying when food becomes scarce, in a complex and changing environment and show through simulations of swarm robots in an A-life environment that evolution of collective behaviour likely can be attributed to bio-inspired evolutionary processes acting at different levels, from the gene and the genome to the individual robot and robot population. PeerJ Inc. 2016-12-21 /pmc/articles/PMC5180581/ /pubmed/28028477 http://dx.doi.org/10.7717/peerj.2812 Text en ©2016 Yao et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Yao, Yao
Storme, Veronique
Marchal, Kathleen
Van de Peer, Yves
Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title_full Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title_fullStr Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title_full_unstemmed Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title_short Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment
title_sort emergent adaptive behaviour of grn-controlled simulated robots in a changing environment
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5180581/
https://www.ncbi.nlm.nih.gov/pubmed/28028477
http://dx.doi.org/10.7717/peerj.2812
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AT vandepeeryves emergentadaptivebehaviourofgrncontrolledsimulatedrobotsinachangingenvironment