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Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism

A clinical tool that can diagnose psychiatric illness using functional or structural magnetic resonance (MR) brain images has the potential to greatly assist physicians and improve treatment efficacy. Working toward the goal of automated diagnosis, we propose an approach for automated classification...

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Detalles Bibliográficos
Autores principales: Ghiassian, Sina, Greiner, Russell, Jin, Ping, Brown, Matthew R. G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5193362/
https://www.ncbi.nlm.nih.gov/pubmed/28030565
http://dx.doi.org/10.1371/journal.pone.0166934
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author Ghiassian, Sina
Greiner, Russell
Jin, Ping
Brown, Matthew R. G.
author_facet Ghiassian, Sina
Greiner, Russell
Jin, Ping
Brown, Matthew R. G.
author_sort Ghiassian, Sina
collection PubMed
description A clinical tool that can diagnose psychiatric illness using functional or structural magnetic resonance (MR) brain images has the potential to greatly assist physicians and improve treatment efficacy. Working toward the goal of automated diagnosis, we propose an approach for automated classification of ADHD and autism based on histogram of oriented gradients (HOG) features extracted from MR brain images, as well as personal characteristic data features. We describe a learning algorithm that can produce effective classifiers for ADHD and autism when run on two large public datasets. The algorithm is able to distinguish ADHD from control with hold-out accuracy of 69.6% (over baseline 55.0%) using personal characteristics and structural brain scan features when trained on the ADHD-200 dataset (769 participants in training set, 171 in test set). It is able to distinguish autism from control with hold-out accuracy of 65.0% (over baseline 51.6%) using functional images with personal characteristic data when trained on the Autism Brain Imaging Data Exchange (ABIDE) dataset (889 participants in training set, 222 in test set). These results outperform all previously presented methods on both datasets. To our knowledge, this is the first demonstration of a single automated learning process that can produce classifiers for distinguishing patients vs. controls from brain imaging data with above-chance accuracy on large datasets for two different psychiatric illnesses (ADHD and autism). Working toward clinical applications requires robustness against real-world conditions, including the substantial variability that often exists among data collected at different institutions. It is therefore important that our algorithm was successful with the large ADHD-200 and ABIDE datasets, which include data from hundreds of participants collected at multiple institutions. While the resulting classifiers are not yet clinically relevant, this work shows that there is a signal in the (f)MRI data that a learning algorithm is able to find. We anticipate this will lead to yet more accurate classifiers, over these and other psychiatric disorders, working toward the goal of a clinical tool for high accuracy differential diagnosis.
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spelling pubmed-51933622017-01-19 Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism Ghiassian, Sina Greiner, Russell Jin, Ping Brown, Matthew R. G. PLoS One Research Article A clinical tool that can diagnose psychiatric illness using functional or structural magnetic resonance (MR) brain images has the potential to greatly assist physicians and improve treatment efficacy. Working toward the goal of automated diagnosis, we propose an approach for automated classification of ADHD and autism based on histogram of oriented gradients (HOG) features extracted from MR brain images, as well as personal characteristic data features. We describe a learning algorithm that can produce effective classifiers for ADHD and autism when run on two large public datasets. The algorithm is able to distinguish ADHD from control with hold-out accuracy of 69.6% (over baseline 55.0%) using personal characteristics and structural brain scan features when trained on the ADHD-200 dataset (769 participants in training set, 171 in test set). It is able to distinguish autism from control with hold-out accuracy of 65.0% (over baseline 51.6%) using functional images with personal characteristic data when trained on the Autism Brain Imaging Data Exchange (ABIDE) dataset (889 participants in training set, 222 in test set). These results outperform all previously presented methods on both datasets. To our knowledge, this is the first demonstration of a single automated learning process that can produce classifiers for distinguishing patients vs. controls from brain imaging data with above-chance accuracy on large datasets for two different psychiatric illnesses (ADHD and autism). Working toward clinical applications requires robustness against real-world conditions, including the substantial variability that often exists among data collected at different institutions. It is therefore important that our algorithm was successful with the large ADHD-200 and ABIDE datasets, which include data from hundreds of participants collected at multiple institutions. While the resulting classifiers are not yet clinically relevant, this work shows that there is a signal in the (f)MRI data that a learning algorithm is able to find. We anticipate this will lead to yet more accurate classifiers, over these and other psychiatric disorders, working toward the goal of a clinical tool for high accuracy differential diagnosis. Public Library of Science 2016-12-28 /pmc/articles/PMC5193362/ /pubmed/28030565 http://dx.doi.org/10.1371/journal.pone.0166934 Text en © 2016 Ghiassian et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ghiassian, Sina
Greiner, Russell
Jin, Ping
Brown, Matthew R. G.
Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title_full Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title_fullStr Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title_full_unstemmed Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title_short Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism
title_sort using functional or structural magnetic resonance images and personal characteristic data to identify adhd and autism
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5193362/
https://www.ncbi.nlm.nih.gov/pubmed/28030565
http://dx.doi.org/10.1371/journal.pone.0166934
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