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The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation
Epigenetic dysregulation is recognized as a hallmark of cancer. In the last 16 years, a CpG island methylator phenotype (CIMP) has been documented in tumors originating from different tissues. However, a looming question in the field is whether or not CIMP is a pan-cancer phenomenon or a tissue-spec...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5197955/ https://www.ncbi.nlm.nih.gov/pubmed/27879658 http://dx.doi.org/10.3390/biom6040045 |
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author | Miller, Brendan F. Sánchez-Vega, Francisco Elnitski, Laura |
author_facet | Miller, Brendan F. Sánchez-Vega, Francisco Elnitski, Laura |
author_sort | Miller, Brendan F. |
collection | PubMed |
description | Epigenetic dysregulation is recognized as a hallmark of cancer. In the last 16 years, a CpG island methylator phenotype (CIMP) has been documented in tumors originating from different tissues. However, a looming question in the field is whether or not CIMP is a pan-cancer phenomenon or a tissue-specific event. Here, we give a synopsis of the history of CIMP and describe the pattern of DNA methylation that defines the CIMP phenotype in different cancer types. We highlight new conceptual approaches of classifying tumors based on CIMP in a cancer type-agnostic way that reveal the presence of distinct CIMP tumors in a multitude of The Cancer Genome Atlas (TCGA) datasets, suggesting that this phenotype may transcend tissue-type specificity. Lastly, we show evidence supporting the clinical relevance of CIMP-positive tumors and suggest that a common CIMP etiology may define new mechanistic targets in cancer treatment. |
format | Online Article Text |
id | pubmed-5197955 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-51979552017-01-04 The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation Miller, Brendan F. Sánchez-Vega, Francisco Elnitski, Laura Biomolecules Review Epigenetic dysregulation is recognized as a hallmark of cancer. In the last 16 years, a CpG island methylator phenotype (CIMP) has been documented in tumors originating from different tissues. However, a looming question in the field is whether or not CIMP is a pan-cancer phenomenon or a tissue-specific event. Here, we give a synopsis of the history of CIMP and describe the pattern of DNA methylation that defines the CIMP phenotype in different cancer types. We highlight new conceptual approaches of classifying tumors based on CIMP in a cancer type-agnostic way that reveal the presence of distinct CIMP tumors in a multitude of The Cancer Genome Atlas (TCGA) datasets, suggesting that this phenotype may transcend tissue-type specificity. Lastly, we show evidence supporting the clinical relevance of CIMP-positive tumors and suggest that a common CIMP etiology may define new mechanistic targets in cancer treatment. MDPI 2016-11-22 /pmc/articles/PMC5197955/ /pubmed/27879658 http://dx.doi.org/10.3390/biom6040045 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Miller, Brendan F. Sánchez-Vega, Francisco Elnitski, Laura The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title | The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title_full | The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title_fullStr | The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title_full_unstemmed | The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title_short | The Emergence of Pan-Cancer CIMP and Its Elusive Interpretation |
title_sort | emergence of pan-cancer cimp and its elusive interpretation |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5197955/ https://www.ncbi.nlm.nih.gov/pubmed/27879658 http://dx.doi.org/10.3390/biom6040045 |
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