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Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum
The vast majority of multicellular organisms coexist with bacterial symbionts that may play various roles during their life cycle. Parasitoid wasp Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae) belongs to the smallest known insects whose size is comparable with some bacteria. Using 16S rR...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5200880/ https://www.ncbi.nlm.nih.gov/pubmed/28066711 http://dx.doi.org/10.1016/j.gdata.2016.12.007 |
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author | Nedoluzhko, A.V. Sharko, F.S. Tsygankova, S.V. Boulygina, E.S. Sokolov, A.S. Rastorguev, S.M. Kadnikov, V.V. Mardanov, A.V. Ravin, N.V. Mazur, A.M. Polilov, A.A. Gruzdeva, N.M. Prokhortchouk, E.B. Skryabin, K.G. |
author_facet | Nedoluzhko, A.V. Sharko, F.S. Tsygankova, S.V. Boulygina, E.S. Sokolov, A.S. Rastorguev, S.M. Kadnikov, V.V. Mardanov, A.V. Ravin, N.V. Mazur, A.M. Polilov, A.A. Gruzdeva, N.M. Prokhortchouk, E.B. Skryabin, K.G. |
author_sort | Nedoluzhko, A.V. |
collection | PubMed |
description | The vast majority of multicellular organisms coexist with bacterial symbionts that may play various roles during their life cycle. Parasitoid wasp Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae) belongs to the smallest known insects whose size is comparable with some bacteria. Using 16S rRNA gene sequencing and Whole Genome Sequencing (WGS), we described microbiota diversity for this arthropod and its potential impact on their lifecycle. Metagenomic sequences were deposited to SRA database which is available at NCBI with accession number SRX2363723 and SRX2363724. We found that small body size and limited lifespan do not lead to a significant reduction of bacterial symbionts diversity. At the same time, we show here a specific feature of microbiota composition in M. amalphitanum – the absence of the Rickettsiaceae family representatives that are known to cause sex-ratio distortion in arthropods and well represented in other populations of parasitoid wasps. |
format | Online Article Text |
id | pubmed-5200880 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-52008802017-01-06 Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum Nedoluzhko, A.V. Sharko, F.S. Tsygankova, S.V. Boulygina, E.S. Sokolov, A.S. Rastorguev, S.M. Kadnikov, V.V. Mardanov, A.V. Ravin, N.V. Mazur, A.M. Polilov, A.A. Gruzdeva, N.M. Prokhortchouk, E.B. Skryabin, K.G. Genom Data Data in Brief Article The vast majority of multicellular organisms coexist with bacterial symbionts that may play various roles during their life cycle. Parasitoid wasp Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae) belongs to the smallest known insects whose size is comparable with some bacteria. Using 16S rRNA gene sequencing and Whole Genome Sequencing (WGS), we described microbiota diversity for this arthropod and its potential impact on their lifecycle. Metagenomic sequences were deposited to SRA database which is available at NCBI with accession number SRX2363723 and SRX2363724. We found that small body size and limited lifespan do not lead to a significant reduction of bacterial symbionts diversity. At the same time, we show here a specific feature of microbiota composition in M. amalphitanum – the absence of the Rickettsiaceae family representatives that are known to cause sex-ratio distortion in arthropods and well represented in other populations of parasitoid wasps. Elsevier 2016-12-21 /pmc/articles/PMC5200880/ /pubmed/28066711 http://dx.doi.org/10.1016/j.gdata.2016.12.007 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data in Brief Article Nedoluzhko, A.V. Sharko, F.S. Tsygankova, S.V. Boulygina, E.S. Sokolov, A.S. Rastorguev, S.M. Kadnikov, V.V. Mardanov, A.V. Ravin, N.V. Mazur, A.M. Polilov, A.A. Gruzdeva, N.M. Prokhortchouk, E.B. Skryabin, K.G. Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title | Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title_full | Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title_fullStr | Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title_full_unstemmed | Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title_short | Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum |
title_sort | metagenomic analysis of microbial community of a parasitoid wasp megaphragma amalphitanum |
topic | Data in Brief Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5200880/ https://www.ncbi.nlm.nih.gov/pubmed/28066711 http://dx.doi.org/10.1016/j.gdata.2016.12.007 |
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