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T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients

Type 1 diabetes mellitus (T1D) is an immune-mediated disease. The autoreactive T cells in T1D patients attack and destroy their own pancreatic cells. In order to systematically investigate the potential autoreactive T cell receptors (TCRs), we used a high-throughput immune repertoire sequencing tech...

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Autores principales: Tong, Yin, Li, Zhoufang, Zhang, Hua, Xia, Ligang, Zhang, Meng, Xu, Ying, Wang, Zhanhui, Deem, Michael W., Sun, Xiaojuan, He, Jiankui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5200939/
https://www.ncbi.nlm.nih.gov/pubmed/28024918
http://dx.doi.org/10.1016/j.gpb.2016.10.003
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author Tong, Yin
Li, Zhoufang
Zhang, Hua
Xia, Ligang
Zhang, Meng
Xu, Ying
Wang, Zhanhui
Deem, Michael W.
Sun, Xiaojuan
He, Jiankui
author_facet Tong, Yin
Li, Zhoufang
Zhang, Hua
Xia, Ligang
Zhang, Meng
Xu, Ying
Wang, Zhanhui
Deem, Michael W.
Sun, Xiaojuan
He, Jiankui
author_sort Tong, Yin
collection PubMed
description Type 1 diabetes mellitus (T1D) is an immune-mediated disease. The autoreactive T cells in T1D patients attack and destroy their own pancreatic cells. In order to systematically investigate the potential autoreactive T cell receptors (TCRs), we used a high-throughput immune repertoire sequencing technique to profile the spectrum of TCRs in individual T1D patients and controls. We sequenced the T cell repertoire of nine T1D patients, four type 2 diabetes (T2D) patients, and six nondiabetic controls. The diversity of the T cell repertoire in T1D patients was significantly decreased in comparison with T2D patients (P = 7.0E−08 for CD4(+) T cells, P = 1.4E−04 for CD8(+) T cells) and nondiabetic controls (P = 2.7E−09 for CD4(+) T cells, P = 7.6E−06 for CD8(+) T cells). Moreover, T1D patients had significantly more highly-expanded T cell clones than T2D patients (P = 5.2E−06 for CD4(+) T cells, P = 1.9E−07 for CD8(+) T cells) and nondiabetic controls (P = 1.7E−07 for CD4(+) T cells, P = 3.3E−03 for CD8(+) T cells). Furthermore, we identified a group of highly-expanded T cell receptor clones that are shared by more than two T1D patients. Although further validation in larger cohorts is needed, our data suggest that T cell receptor diversity measurements may become a valuable tool in investigating diabetes, such as using the diversity as an index to distinguish different types of diabetes.
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spelling pubmed-52009392017-01-06 T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients Tong, Yin Li, Zhoufang Zhang, Hua Xia, Ligang Zhang, Meng Xu, Ying Wang, Zhanhui Deem, Michael W. Sun, Xiaojuan He, Jiankui Genomics Proteomics Bioinformatics Original Research Type 1 diabetes mellitus (T1D) is an immune-mediated disease. The autoreactive T cells in T1D patients attack and destroy their own pancreatic cells. In order to systematically investigate the potential autoreactive T cell receptors (TCRs), we used a high-throughput immune repertoire sequencing technique to profile the spectrum of TCRs in individual T1D patients and controls. We sequenced the T cell repertoire of nine T1D patients, four type 2 diabetes (T2D) patients, and six nondiabetic controls. The diversity of the T cell repertoire in T1D patients was significantly decreased in comparison with T2D patients (P = 7.0E−08 for CD4(+) T cells, P = 1.4E−04 for CD8(+) T cells) and nondiabetic controls (P = 2.7E−09 for CD4(+) T cells, P = 7.6E−06 for CD8(+) T cells). Moreover, T1D patients had significantly more highly-expanded T cell clones than T2D patients (P = 5.2E−06 for CD4(+) T cells, P = 1.9E−07 for CD8(+) T cells) and nondiabetic controls (P = 1.7E−07 for CD4(+) T cells, P = 3.3E−03 for CD8(+) T cells). Furthermore, we identified a group of highly-expanded T cell receptor clones that are shared by more than two T1D patients. Although further validation in larger cohorts is needed, our data suggest that T cell receptor diversity measurements may become a valuable tool in investigating diabetes, such as using the diversity as an index to distinguish different types of diabetes. Elsevier 2016-12 2016-12-24 /pmc/articles/PMC5200939/ /pubmed/28024918 http://dx.doi.org/10.1016/j.gpb.2016.10.003 Text en © 2016 The Authors. Production and hosting by Elsevier B.V. on behalf of Beijing Institute of Genomics, Chinese Academy of Sciences and Genetics Society of China. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Original Research
Tong, Yin
Li, Zhoufang
Zhang, Hua
Xia, Ligang
Zhang, Meng
Xu, Ying
Wang, Zhanhui
Deem, Michael W.
Sun, Xiaojuan
He, Jiankui
T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title_full T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title_fullStr T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title_full_unstemmed T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title_short T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients
title_sort t cell repertoire diversity is decreased in type 1 diabetes patients
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5200939/
https://www.ncbi.nlm.nih.gov/pubmed/28024918
http://dx.doi.org/10.1016/j.gpb.2016.10.003
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