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Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments
BACKGROUND: Over the years, a number of distinct treatments have been adopted for the management of the motor symptoms of Parkinson’s disease (PD), including pharmacologic therapies and deep brain stimulation (DBS). Efficacy is most often evaluated by subjective assessments, which are prone to error...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5203727/ https://www.ncbi.nlm.nih.gov/pubmed/28038673 http://dx.doi.org/10.1186/s12938-016-0290-y |
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author | Machado, Alessandro R. P. Zaidan, Hudson Capanema Paixão, Ana Paula Souza Cavalheiro, Guilherme Lopes Oliveira, Fábio Henrique Monteiro Júnior, João Areis Ferreira Barbosa Naves, Kheline Pereira, Adriano Alves Pereira, Janser Moura Pouratian, Nader Zhuo, Xiaoyi O’Keeffe, Andrew Sharim, Justin Bordelon, Yvette Yang, Laurice Vieira, Marcus Fraga Andrade, Adriano O. |
author_facet | Machado, Alessandro R. P. Zaidan, Hudson Capanema Paixão, Ana Paula Souza Cavalheiro, Guilherme Lopes Oliveira, Fábio Henrique Monteiro Júnior, João Areis Ferreira Barbosa Naves, Kheline Pereira, Adriano Alves Pereira, Janser Moura Pouratian, Nader Zhuo, Xiaoyi O’Keeffe, Andrew Sharim, Justin Bordelon, Yvette Yang, Laurice Vieira, Marcus Fraga Andrade, Adriano O. |
author_sort | Machado, Alessandro R. P. |
collection | PubMed |
description | BACKGROUND: Over the years, a number of distinct treatments have been adopted for the management of the motor symptoms of Parkinson’s disease (PD), including pharmacologic therapies and deep brain stimulation (DBS). Efficacy is most often evaluated by subjective assessments, which are prone to error and dependent on the experience of the examiner. Our goal was to identify an objective means of assessing response to therapy. METHODS: In this study, we employed objective analyses in order to visualize and identify differences between three groups: healthy control (N = 10), subjects with PD treated with DBS (N = 12), and subjects with PD treated with levodopa (N = 16). Subjects were assessed during execution of three dynamic tasks (finger taps, finger to nose, supination and pronation) and a static task (extended arm with no active movement). Measurements were acquired with two pairs of inertial and electromyographic sensors. Feature extraction was applied to estimate the relevant information from the data after which the high-dimensional feature space was reduced to a two-dimensional space using the nonlinear Sammon’s map. Non-parametric analysis of variance was employed for the verification of relevant statistical differences among the groups (p < 0.05). In addition, K-fold cross-validation for discriminant analysis based on Gaussian Finite Mixture Modeling was employed for data classification. RESULTS: The results showed visual and statistical differences for all groups and conditions (i.e., static and dynamic tasks). The employed methods were successful for the discrimination of the groups. Classification accuracy was 81 ± 6% (mean ± standard deviation) and 71 ± 8%, for training and test groups respectively. CONCLUSIONS: This research showed the discrimination between healthy and diseased groups conditions. The methods were also able to discriminate individuals with PD treated with DBS and levodopa. These methods enable objective characterization and visualization of features extracted from inertial and electromyographic sensors for different groups. |
format | Online Article Text |
id | pubmed-5203727 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-52037272017-01-03 Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments Machado, Alessandro R. P. Zaidan, Hudson Capanema Paixão, Ana Paula Souza Cavalheiro, Guilherme Lopes Oliveira, Fábio Henrique Monteiro Júnior, João Areis Ferreira Barbosa Naves, Kheline Pereira, Adriano Alves Pereira, Janser Moura Pouratian, Nader Zhuo, Xiaoyi O’Keeffe, Andrew Sharim, Justin Bordelon, Yvette Yang, Laurice Vieira, Marcus Fraga Andrade, Adriano O. Biomed Eng Online Research BACKGROUND: Over the years, a number of distinct treatments have been adopted for the management of the motor symptoms of Parkinson’s disease (PD), including pharmacologic therapies and deep brain stimulation (DBS). Efficacy is most often evaluated by subjective assessments, which are prone to error and dependent on the experience of the examiner. Our goal was to identify an objective means of assessing response to therapy. METHODS: In this study, we employed objective analyses in order to visualize and identify differences between three groups: healthy control (N = 10), subjects with PD treated with DBS (N = 12), and subjects with PD treated with levodopa (N = 16). Subjects were assessed during execution of three dynamic tasks (finger taps, finger to nose, supination and pronation) and a static task (extended arm with no active movement). Measurements were acquired with two pairs of inertial and electromyographic sensors. Feature extraction was applied to estimate the relevant information from the data after which the high-dimensional feature space was reduced to a two-dimensional space using the nonlinear Sammon’s map. Non-parametric analysis of variance was employed for the verification of relevant statistical differences among the groups (p < 0.05). In addition, K-fold cross-validation for discriminant analysis based on Gaussian Finite Mixture Modeling was employed for data classification. RESULTS: The results showed visual and statistical differences for all groups and conditions (i.e., static and dynamic tasks). The employed methods were successful for the discrimination of the groups. Classification accuracy was 81 ± 6% (mean ± standard deviation) and 71 ± 8%, for training and test groups respectively. CONCLUSIONS: This research showed the discrimination between healthy and diseased groups conditions. The methods were also able to discriminate individuals with PD treated with DBS and levodopa. These methods enable objective characterization and visualization of features extracted from inertial and electromyographic sensors for different groups. BioMed Central 2016-12-30 /pmc/articles/PMC5203727/ /pubmed/28038673 http://dx.doi.org/10.1186/s12938-016-0290-y Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Machado, Alessandro R. P. Zaidan, Hudson Capanema Paixão, Ana Paula Souza Cavalheiro, Guilherme Lopes Oliveira, Fábio Henrique Monteiro Júnior, João Areis Ferreira Barbosa Naves, Kheline Pereira, Adriano Alves Pereira, Janser Moura Pouratian, Nader Zhuo, Xiaoyi O’Keeffe, Andrew Sharim, Justin Bordelon, Yvette Yang, Laurice Vieira, Marcus Fraga Andrade, Adriano O. Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title | Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title_full | Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title_fullStr | Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title_full_unstemmed | Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title_short | Feature visualization and classification for the discrimination between individuals with Parkinson’s disease under levodopa and DBS treatments |
title_sort | feature visualization and classification for the discrimination between individuals with parkinson’s disease under levodopa and dbs treatments |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5203727/ https://www.ncbi.nlm.nih.gov/pubmed/28038673 http://dx.doi.org/10.1186/s12938-016-0290-y |
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