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Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection
OBJECTIVE: This study was to determine the relationship between estimated breeding value and phenotype information after farrowing when juvenile selection was made in candidate pigs without phenotype information. METHODS: After collecting phenotypic and genomic information for the total number of pi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST)
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5205599/ https://www.ncbi.nlm.nih.gov/pubmed/27507181 http://dx.doi.org/10.5713/ajas.16.0394 |
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author | Oh, Jae-Don Na, Chong-Sam Park, Kyung-Do |
author_facet | Oh, Jae-Don Na, Chong-Sam Park, Kyung-Do |
author_sort | Oh, Jae-Don |
collection | PubMed |
description | OBJECTIVE: This study was to determine the relationship between estimated breeding value and phenotype information after farrowing when juvenile selection was made in candidate pigs without phenotype information. METHODS: After collecting phenotypic and genomic information for the total number of piglets born by Landrace pigs, selection accuracy between genomic breeding value estimates using genomic information and breeding value estimates of best linear unbiased prediction (BLUP) using conventional pedigree information were compared. RESULTS: Genetic standard deviation (σ(a)) for the total number of piglets born was 0.91. Since the total number of piglets born for candidate pigs was unknown, the accuracy of the breeding value estimated from pedigree information was 0.080. When genomic information was used, the accuracy of the breeding value was 0.216. Assuming that the replacement rate of sows per year is 100% and generation interval is 1 year, genetic gain per year is 0.346 head when genomic information is used. It is 0.128 when BLUP is used. CONCLUSION: Genetic gain estimated from single step best linear unbiased prediction (ssBLUP) method is by 2.7 times higher than that the one estimated from BLUP method, i.e., 270% more improvement in efficiency. |
format | Online Article Text |
id | pubmed-5205599 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) |
record_format | MEDLINE/PubMed |
spelling | pubmed-52055992017-02-01 Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection Oh, Jae-Don Na, Chong-Sam Park, Kyung-Do Asian-Australas J Anim Sci Article OBJECTIVE: This study was to determine the relationship between estimated breeding value and phenotype information after farrowing when juvenile selection was made in candidate pigs without phenotype information. METHODS: After collecting phenotypic and genomic information for the total number of piglets born by Landrace pigs, selection accuracy between genomic breeding value estimates using genomic information and breeding value estimates of best linear unbiased prediction (BLUP) using conventional pedigree information were compared. RESULTS: Genetic standard deviation (σ(a)) for the total number of piglets born was 0.91. Since the total number of piglets born for candidate pigs was unknown, the accuracy of the breeding value estimated from pedigree information was 0.080. When genomic information was used, the accuracy of the breeding value was 0.216. Assuming that the replacement rate of sows per year is 100% and generation interval is 1 year, genetic gain per year is 0.346 head when genomic information is used. It is 0.128 when BLUP is used. CONCLUSION: Genetic gain estimated from single step best linear unbiased prediction (ssBLUP) method is by 2.7 times higher than that the one estimated from BLUP method, i.e., 270% more improvement in efficiency. Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) 2017-02 2016-08-10 /pmc/articles/PMC5205599/ /pubmed/27507181 http://dx.doi.org/10.5713/ajas.16.0394 Text en Copyright © 2017 by Asian-Australasian Journal of Animal Sciences This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Oh, Jae-Don Na, Chong-Sam Park, Kyung-Do Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title | Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title_full | Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title_fullStr | Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title_full_unstemmed | Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title_short | Validation of selection accuracy for the total number of piglets born in Landrace pigs using genomic selection |
title_sort | validation of selection accuracy for the total number of piglets born in landrace pigs using genomic selection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5205599/ https://www.ncbi.nlm.nih.gov/pubmed/27507181 http://dx.doi.org/10.5713/ajas.16.0394 |
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