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Can the Immune System Perform a t-Test?

The self-nonself discrimination hypothesis remains a landmark concept in immunology. It proposes that tolerance breaks down in the presence of nonself antigens. In strike contrast, in statistics, occurrence of nonself elements in a sample (i.e., outliers) is not obligatory to violate the null hypoth...

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Detalles Bibliográficos
Autores principales: Faria, Bruno Filipe, Mostardinha, Patricia, Vistulo de Abreu, Fernao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5207702/
https://www.ncbi.nlm.nih.gov/pubmed/28046042
http://dx.doi.org/10.1371/journal.pone.0169464
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author Faria, Bruno Filipe
Mostardinha, Patricia
Vistulo de Abreu, Fernao
author_facet Faria, Bruno Filipe
Mostardinha, Patricia
Vistulo de Abreu, Fernao
author_sort Faria, Bruno Filipe
collection PubMed
description The self-nonself discrimination hypothesis remains a landmark concept in immunology. It proposes that tolerance breaks down in the presence of nonself antigens. In strike contrast, in statistics, occurrence of nonself elements in a sample (i.e., outliers) is not obligatory to violate the null hypothesis. Very often, what is crucial is the combination of (self) elements in a sample. The two views on how to detect a change seem challengingly different and it could seem difficult to conceive how immunological cellular interactions could trigger responses with a precision comparable to some statistical tests. Here it is shown that frustrated cellular interactions reconcile the two views within a plausible immunological setting. It is proposed that the adaptive immune system can be promptly activated either when nonself ligands are detected or self-ligands occur in abnormal combinations. In particular we show that cellular populations behaving in this way could perform location statistical tests, with performances comparable to t or KS tests, or even more general data mining tests such as support vector machines or random forests. In more general terms, this work claims that plausible immunological models should provide accurate detection mechanisms for host protection and, furthermore, that investigation on mechanisms leading to improved detection in “in silico” models can help unveil how the real immune system works.
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spelling pubmed-52077022017-01-19 Can the Immune System Perform a t-Test? Faria, Bruno Filipe Mostardinha, Patricia Vistulo de Abreu, Fernao PLoS One Research Article The self-nonself discrimination hypothesis remains a landmark concept in immunology. It proposes that tolerance breaks down in the presence of nonself antigens. In strike contrast, in statistics, occurrence of nonself elements in a sample (i.e., outliers) is not obligatory to violate the null hypothesis. Very often, what is crucial is the combination of (self) elements in a sample. The two views on how to detect a change seem challengingly different and it could seem difficult to conceive how immunological cellular interactions could trigger responses with a precision comparable to some statistical tests. Here it is shown that frustrated cellular interactions reconcile the two views within a plausible immunological setting. It is proposed that the adaptive immune system can be promptly activated either when nonself ligands are detected or self-ligands occur in abnormal combinations. In particular we show that cellular populations behaving in this way could perform location statistical tests, with performances comparable to t or KS tests, or even more general data mining tests such as support vector machines or random forests. In more general terms, this work claims that plausible immunological models should provide accurate detection mechanisms for host protection and, furthermore, that investigation on mechanisms leading to improved detection in “in silico” models can help unveil how the real immune system works. Public Library of Science 2017-01-03 /pmc/articles/PMC5207702/ /pubmed/28046042 http://dx.doi.org/10.1371/journal.pone.0169464 Text en © 2017 Faria et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Faria, Bruno Filipe
Mostardinha, Patricia
Vistulo de Abreu, Fernao
Can the Immune System Perform a t-Test?
title Can the Immune System Perform a t-Test?
title_full Can the Immune System Perform a t-Test?
title_fullStr Can the Immune System Perform a t-Test?
title_full_unstemmed Can the Immune System Perform a t-Test?
title_short Can the Immune System Perform a t-Test?
title_sort can the immune system perform a t-test?
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5207702/
https://www.ncbi.nlm.nih.gov/pubmed/28046042
http://dx.doi.org/10.1371/journal.pone.0169464
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