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CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy pa...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216097/ https://www.ncbi.nlm.nih.gov/pubmed/28111532 http://dx.doi.org/10.1007/s40846-016-0182-4 |
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author | Xue, Di-Xiu Zhang, Rong Feng, Hui Wang, Ya-Lei |
author_facet | Xue, Di-Xiu Zhang, Rong Feng, Hui Wang, Ya-Lei |
author_sort | Xue, Di-Xiu |
collection | PubMed |
description | This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy patch-generating algorithm and a specialized CNN named NBI-Net are designed to extract hierarchical features from patches. We investigate a series of data augmentation techniques to progressively improve the prediction invariance of image scaling and rotation. For classifier boosting, SVM is used as an alternative to softmax to enhance generalization ability. The effectiveness of CNN feature representation ability is discussed for a set of widely used CNN models, including AlexNet, VGG-16, and GoogLeNet. Experiments are conducted on the NBI-ME dataset. The recognition rate is up to 92.74% on the patch level with data augmentation and classifier boosting. The results show that the combined CNN-SVM model beats models of traditional features with SVM as well as the original CNN with softmax. The synthesis results indicate that our system is able to assist clinical diagnosis to a certain extent. |
format | Online Article Text |
id | pubmed-5216097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-52160972017-01-18 CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation Xue, Di-Xiu Zhang, Rong Feng, Hui Wang, Ya-Lei J Med Biol Eng Original Article This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy patch-generating algorithm and a specialized CNN named NBI-Net are designed to extract hierarchical features from patches. We investigate a series of data augmentation techniques to progressively improve the prediction invariance of image scaling and rotation. For classifier boosting, SVM is used as an alternative to softmax to enhance generalization ability. The effectiveness of CNN feature representation ability is discussed for a set of widely used CNN models, including AlexNet, VGG-16, and GoogLeNet. Experiments are conducted on the NBI-ME dataset. The recognition rate is up to 92.74% on the patch level with data augmentation and classifier boosting. The results show that the combined CNN-SVM model beats models of traditional features with SVM as well as the original CNN with softmax. The synthesis results indicate that our system is able to assist clinical diagnosis to a certain extent. Springer Berlin Heidelberg 2016-12-10 2016 /pmc/articles/PMC5216097/ /pubmed/28111532 http://dx.doi.org/10.1007/s40846-016-0182-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Article Xue, Di-Xiu Zhang, Rong Feng, Hui Wang, Ya-Lei CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title | CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title_full | CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title_fullStr | CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title_full_unstemmed | CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title_short | CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation |
title_sort | cnn-svm for microvascular morphological type recognition with data augmentation |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216097/ https://www.ncbi.nlm.nih.gov/pubmed/28111532 http://dx.doi.org/10.1007/s40846-016-0182-4 |
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