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CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation

This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy pa...

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Detalles Bibliográficos
Autores principales: Xue, Di-Xiu, Zhang, Rong, Feng, Hui, Wang, Ya-Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216097/
https://www.ncbi.nlm.nih.gov/pubmed/28111532
http://dx.doi.org/10.1007/s40846-016-0182-4
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author Xue, Di-Xiu
Zhang, Rong
Feng, Hui
Wang, Ya-Lei
author_facet Xue, Di-Xiu
Zhang, Rong
Feng, Hui
Wang, Ya-Lei
author_sort Xue, Di-Xiu
collection PubMed
description This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy patch-generating algorithm and a specialized CNN named NBI-Net are designed to extract hierarchical features from patches. We investigate a series of data augmentation techniques to progressively improve the prediction invariance of image scaling and rotation. For classifier boosting, SVM is used as an alternative to softmax to enhance generalization ability. The effectiveness of CNN feature representation ability is discussed for a set of widely used CNN models, including AlexNet, VGG-16, and GoogLeNet. Experiments are conducted on the NBI-ME dataset. The recognition rate is up to 92.74% on the patch level with data augmentation and classifier boosting. The results show that the combined CNN-SVM model beats models of traditional features with SVM as well as the original CNN with softmax. The synthesis results indicate that our system is able to assist clinical diagnosis to a certain extent.
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spelling pubmed-52160972017-01-18 CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation Xue, Di-Xiu Zhang, Rong Feng, Hui Wang, Ya-Lei J Med Biol Eng Original Article This paper focuses on the problem of feature extraction and the classification of microvascular morphological types to aid esophageal cancer detection. We present a patch-based system with a hybrid SVM model with data augmentation for intraepithelial papillary capillary loop recognition. A greedy patch-generating algorithm and a specialized CNN named NBI-Net are designed to extract hierarchical features from patches. We investigate a series of data augmentation techniques to progressively improve the prediction invariance of image scaling and rotation. For classifier boosting, SVM is used as an alternative to softmax to enhance generalization ability. The effectiveness of CNN feature representation ability is discussed for a set of widely used CNN models, including AlexNet, VGG-16, and GoogLeNet. Experiments are conducted on the NBI-ME dataset. The recognition rate is up to 92.74% on the patch level with data augmentation and classifier boosting. The results show that the combined CNN-SVM model beats models of traditional features with SVM as well as the original CNN with softmax. The synthesis results indicate that our system is able to assist clinical diagnosis to a certain extent. Springer Berlin Heidelberg 2016-12-10 2016 /pmc/articles/PMC5216097/ /pubmed/28111532 http://dx.doi.org/10.1007/s40846-016-0182-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Xue, Di-Xiu
Zhang, Rong
Feng, Hui
Wang, Ya-Lei
CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title_full CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title_fullStr CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title_full_unstemmed CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title_short CNN-SVM for Microvascular Morphological Type Recognition with Data Augmentation
title_sort cnn-svm for microvascular morphological type recognition with data augmentation
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216097/
https://www.ncbi.nlm.nih.gov/pubmed/28111532
http://dx.doi.org/10.1007/s40846-016-0182-4
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