Cargando…

Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach

Brachypodium distachyon is a suitable plant model for studying temperate cereal crops, such as wheat, barley or rice, and helpful in the study of the grain cell wall. Indeed, the most abundant hemicelluloses that are in the B. distachyon cell wall of grain are (1-3)(1-4)-β-glucans and arabinoxylans,...

Descripción completa

Detalles Bibliográficos
Autores principales: Francin-Allami, Mathilde, Lollier, Virginie, Pavlovic, Marija, San Clemente, Hélène, Rogniaux, Hélène, Jamet, Elisabeth, Guillon, Fabienne, Larré, Colette
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217356/
https://www.ncbi.nlm.nih.gov/pubmed/28248231
http://dx.doi.org/10.3390/proteomes4030021
_version_ 1782492093260759040
author Francin-Allami, Mathilde
Lollier, Virginie
Pavlovic, Marija
San Clemente, Hélène
Rogniaux, Hélène
Jamet, Elisabeth
Guillon, Fabienne
Larré, Colette
author_facet Francin-Allami, Mathilde
Lollier, Virginie
Pavlovic, Marija
San Clemente, Hélène
Rogniaux, Hélène
Jamet, Elisabeth
Guillon, Fabienne
Larré, Colette
author_sort Francin-Allami, Mathilde
collection PubMed
description Brachypodium distachyon is a suitable plant model for studying temperate cereal crops, such as wheat, barley or rice, and helpful in the study of the grain cell wall. Indeed, the most abundant hemicelluloses that are in the B. distachyon cell wall of grain are (1-3)(1-4)-β-glucans and arabinoxylans, in a ratio similar to those of cereals such as barley or oat. Conversely, these cell walls contain few pectins and xyloglucans. Cell walls play an important role in grain physiology. The modifications of cell wall polysaccharides that occur during grain development and filling are key in the determination of the size and weight of the cereal grains. The mechanisms required for cell wall assembly and remodelling are poorly understood, especially in cereals. To provide a better understanding of these processes, we purified the cell wall at three developmental stages of the B. distachyon grain. The proteins were then extracted, and a quantitative and comparative LC-MS/MS analysis was performed to investigate the protein profile changes during grain development. Over 466 cell wall proteins (CWPs) were identified and classified according to their predicted functions. This work highlights the different proteome profiles that we could relate to the main phases of grain development and to the reorganization of cell wall polysaccharides that occurs during these different developmental stages. These results provide a good springboard to pursue functional validation to better understand the role of CWPs in the assembly and remodelling of the grain cell wall of cereals.
format Online
Article
Text
id pubmed-5217356
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-52173562017-02-27 Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach Francin-Allami, Mathilde Lollier, Virginie Pavlovic, Marija San Clemente, Hélène Rogniaux, Hélène Jamet, Elisabeth Guillon, Fabienne Larré, Colette Proteomes Article Brachypodium distachyon is a suitable plant model for studying temperate cereal crops, such as wheat, barley or rice, and helpful in the study of the grain cell wall. Indeed, the most abundant hemicelluloses that are in the B. distachyon cell wall of grain are (1-3)(1-4)-β-glucans and arabinoxylans, in a ratio similar to those of cereals such as barley or oat. Conversely, these cell walls contain few pectins and xyloglucans. Cell walls play an important role in grain physiology. The modifications of cell wall polysaccharides that occur during grain development and filling are key in the determination of the size and weight of the cereal grains. The mechanisms required for cell wall assembly and remodelling are poorly understood, especially in cereals. To provide a better understanding of these processes, we purified the cell wall at three developmental stages of the B. distachyon grain. The proteins were then extracted, and a quantitative and comparative LC-MS/MS analysis was performed to investigate the protein profile changes during grain development. Over 466 cell wall proteins (CWPs) were identified and classified according to their predicted functions. This work highlights the different proteome profiles that we could relate to the main phases of grain development and to the reorganization of cell wall polysaccharides that occurs during these different developmental stages. These results provide a good springboard to pursue functional validation to better understand the role of CWPs in the assembly and remodelling of the grain cell wall of cereals. MDPI 2016-06-24 /pmc/articles/PMC5217356/ /pubmed/28248231 http://dx.doi.org/10.3390/proteomes4030021 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Francin-Allami, Mathilde
Lollier, Virginie
Pavlovic, Marija
San Clemente, Hélène
Rogniaux, Hélène
Jamet, Elisabeth
Guillon, Fabienne
Larré, Colette
Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title_full Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title_fullStr Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title_full_unstemmed Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title_short Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach
title_sort understanding the remodelling of cell walls during brachypodium distachyon grain development through a sub-cellular quantitative proteomic approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217356/
https://www.ncbi.nlm.nih.gov/pubmed/28248231
http://dx.doi.org/10.3390/proteomes4030021
work_keys_str_mv AT francinallamimathilde understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT lolliervirginie understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT pavlovicmarija understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT sanclementehelene understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT rogniauxhelene understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT jametelisabeth understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT guillonfabienne understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach
AT larrecolette understandingtheremodellingofcellwallsduringbrachypodiumdistachyongraindevelopmentthroughasubcellularquantitativeproteomicapproach