High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea

Nakamurella lactea DLS-10(T) , isolated from rock in Korea, is one of the four type strains of the genus Nakamurella. In this study, we describe the high quality draft genome of N. lactea DLS-10(T) and its annotation. A summary of phenotypic data collected from previously published studies was also...

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Autores principales: Nouioui, Imen, Göker, Markus, Carro, Lorena, Montero-Calasanz, Maria del Carmen, Rohde, Manfred, Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217420/
https://www.ncbi.nlm.nih.gov/pubmed/28074122
http://dx.doi.org/10.1186/s40793-016-0216-0
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author Nouioui, Imen
Göker, Markus
Carro, Lorena
Montero-Calasanz, Maria del Carmen
Rohde, Manfred
Woyke, Tanja
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Nouioui, Imen
Göker, Markus
Carro, Lorena
Montero-Calasanz, Maria del Carmen
Rohde, Manfred
Woyke, Tanja
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Nouioui, Imen
collection PubMed
description Nakamurella lactea DLS-10(T) , isolated from rock in Korea, is one of the four type strains of the genus Nakamurella. In this study, we describe the high quality draft genome of N. lactea DLS-10(T) and its annotation. A summary of phenotypic data collected from previously published studies was also included. The genome of strain DLS-10(T) presents a size of 5.82 Mpb, 5100 protein coding genes, and a C + G content of 68.9%. Based on the genome analysis, emended description of N. lactea in terms of G + C content was also proposed.
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spelling pubmed-52174202017-01-10 High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea Nouioui, Imen Göker, Markus Carro, Lorena Montero-Calasanz, Maria del Carmen Rohde, Manfred Woyke, Tanja Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Report Nakamurella lactea DLS-10(T) , isolated from rock in Korea, is one of the four type strains of the genus Nakamurella. In this study, we describe the high quality draft genome of N. lactea DLS-10(T) and its annotation. A summary of phenotypic data collected from previously published studies was also included. The genome of strain DLS-10(T) presents a size of 5.82 Mpb, 5100 protein coding genes, and a C + G content of 68.9%. Based on the genome analysis, emended description of N. lactea in terms of G + C content was also proposed. BioMed Central 2017-01-06 /pmc/articles/PMC5217420/ /pubmed/28074122 http://dx.doi.org/10.1186/s40793-016-0216-0 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Nouioui, Imen
Göker, Markus
Carro, Lorena
Montero-Calasanz, Maria del Carmen
Rohde, Manfred
Woyke, Tanja
Kyrpides, Nikos C.
Klenk, Hans-Peter
High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title_full High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title_fullStr High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title_full_unstemmed High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title_short High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
title_sort high quality draft genome of nakamurella lactea type strain, a rock actinobacterium, and emended description of nakamurella lactea
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217420/
https://www.ncbi.nlm.nih.gov/pubmed/28074122
http://dx.doi.org/10.1186/s40793-016-0216-0
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