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LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients
BACKGROUND: Microscopy and rapid diagnosis tests have a limited sensitivity in diagnosis of malaria by Plasmodium ovale. The LAMP kit (LoopAMP®) can be used in the field without special equipment and could have an important role in malaria control programmes in endemic areas and for malaria diagnosi...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5219760/ https://www.ncbi.nlm.nih.gov/pubmed/28061871 http://dx.doi.org/10.1186/s12936-016-1669-8 |
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author | Cuadros, Juan Martin Ramírez, Alexandra González, Iveth J. Ding, Xavier C. Perez Tanoira, Ramon Rojo-Marcos, Gerardo Gómez-Herruz, Peña Rubio, Jose Miguel |
author_facet | Cuadros, Juan Martin Ramírez, Alexandra González, Iveth J. Ding, Xavier C. Perez Tanoira, Ramon Rojo-Marcos, Gerardo Gómez-Herruz, Peña Rubio, Jose Miguel |
author_sort | Cuadros, Juan |
collection | PubMed |
description | BACKGROUND: Microscopy and rapid diagnosis tests have a limited sensitivity in diagnosis of malaria by Plasmodium ovale. The LAMP kit (LoopAMP®) can be used in the field without special equipment and could have an important role in malaria control programmes in endemic areas and for malaria diagnosis in returned travellers. The performance of the Pan primer of the kit in detecting malaria by P. ovale was compared with the results of standard nPCR in samples of patients returning from P. ovale endemic areas. METHODS: Plasmodium ovale positive samples (29, tested by PCR and/or microscopy) and malaria negative specimens (398, tested by microscopy and PCR) were collected in different hospitals of Europe from June 2014 to March 2016 and frozen at −20 °C. Boil and spin method was used to extract DNA from all samples and amplification was performed with LoopAMP® MALARIA kit (Eiken Chemical, Japan) in an automated turbidimeter (Eiken 500). The results of LAMP read by turbidimetry and with the naked eye were compared. RESULTS: The kit showed a sensitivity of 100% and a specificity of 97.24% with positive and negative predictive values of 72.5 and 100%, respectively. Naked eyed readings were in accordance with turbidimetry readings (sensitivity, 92.5%, specificity, 98.96% and positive and negative predictive values, respectively, 90.24 and 99.22%). The limit of detection of LAMP assay for P. ovale was between 0.8 and 2 parasites/µl. CONCLUSIONS: The Pan primer of the Malaria kit LoopAMP® can detect P. ovale at very low-levels and showed a predictive negative value of 100%. This tool can be useful in malaria control and elimination programmes and in returned travellers from P. ovale endemic areas. Naked eye readings are equivalent to automated turbidimeter readings in specimens obtained with EDTA. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12936-016-1669-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5219760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-52197602017-01-10 LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients Cuadros, Juan Martin Ramírez, Alexandra González, Iveth J. Ding, Xavier C. Perez Tanoira, Ramon Rojo-Marcos, Gerardo Gómez-Herruz, Peña Rubio, Jose Miguel Malar J Research BACKGROUND: Microscopy and rapid diagnosis tests have a limited sensitivity in diagnosis of malaria by Plasmodium ovale. The LAMP kit (LoopAMP®) can be used in the field without special equipment and could have an important role in malaria control programmes in endemic areas and for malaria diagnosis in returned travellers. The performance of the Pan primer of the kit in detecting malaria by P. ovale was compared with the results of standard nPCR in samples of patients returning from P. ovale endemic areas. METHODS: Plasmodium ovale positive samples (29, tested by PCR and/or microscopy) and malaria negative specimens (398, tested by microscopy and PCR) were collected in different hospitals of Europe from June 2014 to March 2016 and frozen at −20 °C. Boil and spin method was used to extract DNA from all samples and amplification was performed with LoopAMP® MALARIA kit (Eiken Chemical, Japan) in an automated turbidimeter (Eiken 500). The results of LAMP read by turbidimetry and with the naked eye were compared. RESULTS: The kit showed a sensitivity of 100% and a specificity of 97.24% with positive and negative predictive values of 72.5 and 100%, respectively. Naked eyed readings were in accordance with turbidimetry readings (sensitivity, 92.5%, specificity, 98.96% and positive and negative predictive values, respectively, 90.24 and 99.22%). The limit of detection of LAMP assay for P. ovale was between 0.8 and 2 parasites/µl. CONCLUSIONS: The Pan primer of the Malaria kit LoopAMP® can detect P. ovale at very low-levels and showed a predictive negative value of 100%. This tool can be useful in malaria control and elimination programmes and in returned travellers from P. ovale endemic areas. Naked eye readings are equivalent to automated turbidimeter readings in specimens obtained with EDTA. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12936-016-1669-8) contains supplementary material, which is available to authorized users. BioMed Central 2017-01-07 /pmc/articles/PMC5219760/ /pubmed/28061871 http://dx.doi.org/10.1186/s12936-016-1669-8 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Cuadros, Juan Martin Ramírez, Alexandra González, Iveth J. Ding, Xavier C. Perez Tanoira, Ramon Rojo-Marcos, Gerardo Gómez-Herruz, Peña Rubio, Jose Miguel LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title | LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title_full | LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title_fullStr | LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title_full_unstemmed | LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title_short | LAMP kit for diagnosis of non-falciparum malaria in Plasmodium ovale infected patients |
title_sort | lamp kit for diagnosis of non-falciparum malaria in plasmodium ovale infected patients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5219760/ https://www.ncbi.nlm.nih.gov/pubmed/28061871 http://dx.doi.org/10.1186/s12936-016-1669-8 |
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