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Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea

This study for the first time provides insight into the bacterial community in the benthic region of the Off‐Terengganu Coastline, which is considered to be anthropogenically polluted due to heavy fishing vessel commotion. Subsurface bacteria were randomly collected from two locations at different d...

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Autores principales: Marziah, Zahar, Mahdzir, Akbariah, Musa, Md. Nor, Jaafar, Abu Bakar, Azhim, Azran, Hara, Hirofumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5221450/
https://www.ncbi.nlm.nih.gov/pubmed/27256005
http://dx.doi.org/10.1002/mbo3.380
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author Marziah, Zahar
Mahdzir, Akbariah
Musa, Md. Nor
Jaafar, Abu Bakar
Azhim, Azran
Hara, Hirofumi
author_facet Marziah, Zahar
Mahdzir, Akbariah
Musa, Md. Nor
Jaafar, Abu Bakar
Azhim, Azran
Hara, Hirofumi
author_sort Marziah, Zahar
collection PubMed
description This study for the first time provides insight into the bacterial community in the benthic region of the Off‐Terengganu Coastline, which is considered to be anthropogenically polluted due to heavy fishing vessel commotion. Subsurface bacteria were randomly collected from two locations at different depths and were examined using the 16S rDNA V3‐V4 marker gene on the Illumina(™) Miseq platform. In addition, the physiochemical parameters of the sediment were also measured. Surprisingly, the results show a high diversity of sulfur‐oxidizing bacteria in the surveyed area, where Sulfurovum sp. was identified to predominate the overall bacterial community. The physiochemical parameters reveal insufficient evidence of hydrothermal vents in the surveyed area. However, there are traces of hydrocarbon pollutants such as gasoline, diesel, and mineral oil in this area. It is assumed that sediment accumulation in the lee of breakwater plays an important role in trapping the runoff from the nearby harbor, which includes oil spills. Based on the common knowledge, Sulvurofum sp. is a native bacterium that exists in deep hydrothermal vents and volcanic territories. Although the reason for the abundance of Sulfurovum sp. in the surveyed area is still unclear, there is a possibility that metabolic adaptation plays an important role in regulating hydrocarbon pollutants for survival. The work presented in this paper therefore has profound implications for future studies on Sulfurovum sp. versatility. However, future research is needed to strengthen the findings of this study and to provide a better evidence regarding the metabolic response of this bacterium toward hydrocarbon pollutants.
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spelling pubmed-52214502017-01-11 Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea Marziah, Zahar Mahdzir, Akbariah Musa, Md. Nor Jaafar, Abu Bakar Azhim, Azran Hara, Hirofumi Microbiologyopen Original Research This study for the first time provides insight into the bacterial community in the benthic region of the Off‐Terengganu Coastline, which is considered to be anthropogenically polluted due to heavy fishing vessel commotion. Subsurface bacteria were randomly collected from two locations at different depths and were examined using the 16S rDNA V3‐V4 marker gene on the Illumina(™) Miseq platform. In addition, the physiochemical parameters of the sediment were also measured. Surprisingly, the results show a high diversity of sulfur‐oxidizing bacteria in the surveyed area, where Sulfurovum sp. was identified to predominate the overall bacterial community. The physiochemical parameters reveal insufficient evidence of hydrothermal vents in the surveyed area. However, there are traces of hydrocarbon pollutants such as gasoline, diesel, and mineral oil in this area. It is assumed that sediment accumulation in the lee of breakwater plays an important role in trapping the runoff from the nearby harbor, which includes oil spills. Based on the common knowledge, Sulvurofum sp. is a native bacterium that exists in deep hydrothermal vents and volcanic territories. Although the reason for the abundance of Sulfurovum sp. in the surveyed area is still unclear, there is a possibility that metabolic adaptation plays an important role in regulating hydrocarbon pollutants for survival. The work presented in this paper therefore has profound implications for future studies on Sulfurovum sp. versatility. However, future research is needed to strengthen the findings of this study and to provide a better evidence regarding the metabolic response of this bacterium toward hydrocarbon pollutants. John Wiley and Sons Inc. 2016-06-03 /pmc/articles/PMC5221450/ /pubmed/27256005 http://dx.doi.org/10.1002/mbo3.380 Text en © 2016 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Marziah, Zahar
Mahdzir, Akbariah
Musa, Md. Nor
Jaafar, Abu Bakar
Azhim, Azran
Hara, Hirofumi
Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title_full Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title_fullStr Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title_full_unstemmed Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title_short Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
title_sort abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐terengganu coast of the south china sea
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5221450/
https://www.ncbi.nlm.nih.gov/pubmed/27256005
http://dx.doi.org/10.1002/mbo3.380
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