Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato

Pseudomonas brassicacearum strain L13-6-12 is a rhizosphere colonizer of potato, lettuce and sugar beet. Previous studies have shown that this motile, Gram-negative, non-sporulating bacterium is an effective biocontrol agent against different phytopathogens. Here, we announce and describe the comple...

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Detalles Bibliográficos
Autores principales: Zachow, Christin, Müller, Henry, Monk, Jana, Berg, Gabriele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223336/
https://www.ncbi.nlm.nih.gov/pubmed/28078051
http://dx.doi.org/10.1186/s40793-016-0215-1
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author Zachow, Christin
Müller, Henry
Monk, Jana
Berg, Gabriele
author_facet Zachow, Christin
Müller, Henry
Monk, Jana
Berg, Gabriele
author_sort Zachow, Christin
collection PubMed
description Pseudomonas brassicacearum strain L13-6-12 is a rhizosphere colonizer of potato, lettuce and sugar beet. Previous studies have shown that this motile, Gram-negative, non-sporulating bacterium is an effective biocontrol agent against different phytopathogens. Here, we announce and describe the complete genome sequence of P. brassicacearum L13-6-12 consisting of a single 6.7 Mb circular chromosome that consists of 5773 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes encoding specialized functions for pathogen suppression, thriving in the rhizosphere and interacting with eukaryotic organisms.
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spelling pubmed-52233362017-01-11 Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato Zachow, Christin Müller, Henry Monk, Jana Berg, Gabriele Stand Genomic Sci Short Genome Report Pseudomonas brassicacearum strain L13-6-12 is a rhizosphere colonizer of potato, lettuce and sugar beet. Previous studies have shown that this motile, Gram-negative, non-sporulating bacterium is an effective biocontrol agent against different phytopathogens. Here, we announce and describe the complete genome sequence of P. brassicacearum L13-6-12 consisting of a single 6.7 Mb circular chromosome that consists of 5773 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes encoding specialized functions for pathogen suppression, thriving in the rhizosphere and interacting with eukaryotic organisms. BioMed Central 2017-01-09 /pmc/articles/PMC5223336/ /pubmed/28078051 http://dx.doi.org/10.1186/s40793-016-0215-1 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Zachow, Christin
Müller, Henry
Monk, Jana
Berg, Gabriele
Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title_full Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title_fullStr Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title_full_unstemmed Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title_short Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato
title_sort complete genome sequence of pseudomonas brassicacearum strain l13-6-12, a biological control agent from the rhizosphere of potato
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223336/
https://www.ncbi.nlm.nih.gov/pubmed/28078051
http://dx.doi.org/10.1186/s40793-016-0215-1
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