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Automatic liver segmentation on Computed Tomography using random walkers for treatment planning

Segmentation of the liver from Computed Tomography (CT) volumes plays an important role during the choice of treatment strategies for liver diseases. Despite lots of attention, liver segmentation remains a challenging task due to the lack of visible edges on most boundaries of the liver coupled with...

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Autores principales: Moghbel, Mehrdad, Mashohor, Syamsiah, Mahmud, Rozi, Saripan, M. Iqbal Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Leibniz Research Centre for Working Environment and Human Factors 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5225683/
https://www.ncbi.nlm.nih.gov/pubmed/28096782
http://dx.doi.org/10.17179/excli2016-473
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author Moghbel, Mehrdad
Mashohor, Syamsiah
Mahmud, Rozi
Saripan, M. Iqbal Bin
author_facet Moghbel, Mehrdad
Mashohor, Syamsiah
Mahmud, Rozi
Saripan, M. Iqbal Bin
author_sort Moghbel, Mehrdad
collection PubMed
description Segmentation of the liver from Computed Tomography (CT) volumes plays an important role during the choice of treatment strategies for liver diseases. Despite lots of attention, liver segmentation remains a challenging task due to the lack of visible edges on most boundaries of the liver coupled with high variability of both intensity patterns and anatomical appearances with all these difficulties becoming more prominent in pathological livers. To achieve a more accurate segmentation, a random walker based framework is proposed that can segment contrast-enhanced livers CT images with great accuracy and speed. Based on the location of the right lung lobe, the liver dome is automatically detected thus eliminating the need for manual initialization. The computational requirements are further minimized utilizing rib-caged area segmentation, the liver is then extracted by utilizing random walker method. The proposed method was able to achieve one of the highest accuracies reported in the literature against a mixed healthy and pathological liver dataset compared to other segmentation methods with an overlap error of 4.47 % and dice similarity coefficient of 0.94 while it showed exceptional accuracy on segmenting the pathological livers with an overlap error of 5.95 % and dice similarity coefficient of 0.91.
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spelling pubmed-52256832017-01-17 Automatic liver segmentation on Computed Tomography using random walkers for treatment planning Moghbel, Mehrdad Mashohor, Syamsiah Mahmud, Rozi Saripan, M. Iqbal Bin EXCLI J Original Article Segmentation of the liver from Computed Tomography (CT) volumes plays an important role during the choice of treatment strategies for liver diseases. Despite lots of attention, liver segmentation remains a challenging task due to the lack of visible edges on most boundaries of the liver coupled with high variability of both intensity patterns and anatomical appearances with all these difficulties becoming more prominent in pathological livers. To achieve a more accurate segmentation, a random walker based framework is proposed that can segment contrast-enhanced livers CT images with great accuracy and speed. Based on the location of the right lung lobe, the liver dome is automatically detected thus eliminating the need for manual initialization. The computational requirements are further minimized utilizing rib-caged area segmentation, the liver is then extracted by utilizing random walker method. The proposed method was able to achieve one of the highest accuracies reported in the literature against a mixed healthy and pathological liver dataset compared to other segmentation methods with an overlap error of 4.47 % and dice similarity coefficient of 0.94 while it showed exceptional accuracy on segmenting the pathological livers with an overlap error of 5.95 % and dice similarity coefficient of 0.91. Leibniz Research Centre for Working Environment and Human Factors 2016-08-10 /pmc/articles/PMC5225683/ /pubmed/28096782 http://dx.doi.org/10.17179/excli2016-473 Text en Copyright © 2016 Moghbel et al. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Licence (http://creativecommons.org/licenses/by/4.0/) You are free to copy, distribute and transmit the work, provided the original author and source are credited.
spellingShingle Original Article
Moghbel, Mehrdad
Mashohor, Syamsiah
Mahmud, Rozi
Saripan, M. Iqbal Bin
Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title_full Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title_fullStr Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title_full_unstemmed Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title_short Automatic liver segmentation on Computed Tomography using random walkers for treatment planning
title_sort automatic liver segmentation on computed tomography using random walkers for treatment planning
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5225683/
https://www.ncbi.nlm.nih.gov/pubmed/28096782
http://dx.doi.org/10.17179/excli2016-473
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