Cargando…

Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments

During a study of indoor fungi, 145 isolates belonging to Chaetomiaceae were cultured from air, swab and dust samples from 19 countries. Based on the phylogenetic analyses of DNA-directed RNA polymerase II second largest subunit (rpb2), β-tubulin (tub2), ITS and 28S large subunit (LSU) nrDNA sequenc...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, X.W., Houbraken, J., Groenewald, J.Z., Meijer, M., Andersen, B., Nielsen, K.F., Crous, P.W., Samson, R.A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: CBS Fungal Biodiversity Centre 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5226397/
https://www.ncbi.nlm.nih.gov/pubmed/28082757
http://dx.doi.org/10.1016/j.simyco.2016.11.005
_version_ 1782493643103272960
author Wang, X.W.
Houbraken, J.
Groenewald, J.Z.
Meijer, M.
Andersen, B.
Nielsen, K.F.
Crous, P.W.
Samson, R.A.
author_facet Wang, X.W.
Houbraken, J.
Groenewald, J.Z.
Meijer, M.
Andersen, B.
Nielsen, K.F.
Crous, P.W.
Samson, R.A.
author_sort Wang, X.W.
collection PubMed
description During a study of indoor fungi, 145 isolates belonging to Chaetomiaceae were cultured from air, swab and dust samples from 19 countries. Based on the phylogenetic analyses of DNA-directed RNA polymerase II second largest subunit (rpb2), β-tubulin (tub2), ITS and 28S large subunit (LSU) nrDNA sequences, together with morphological comparisons with related genera and species, 30 indoor taxa are recognised, of which 22 represent known species, seven are described as new, and one remains to be identified to species level. In our collection, 69 % of the indoor isolates with six species cluster with members of the Chaetomium globosum species complex, representing Chaetomium sensu stricto. The other indoor species fall into nine lineages that are separated from each other with several known chaetomiaceous genera occurring among them. No generic names are available for five of those lineages, and the following new genera are introduced here: Amesia with three indoor species, Arcopilus with one indoor species, Collariella with four indoor species, Dichotomopilus with seven indoor species and Ovatospora with two indoor species. The generic concept of Botryotrichum is expanded to include Emilmuelleria and the chaetomium-like species B. muromum (= Ch. murorum) in which two indoor species are included. The generic concept of Subramaniula is expanded to include several chaetomium-like taxa as well as one indoor species. Humicola is recognised as a distinct genus including two indoor taxa. According to this study, Ch. globosum is the most abundant Chaetomiaceae indoor species (74/145), followed by Ch. cochliodes (17/145), Ch. elatum (6/145) and B. piluliferum (5/145). The morphological diversity of indoor Chaetomiaceae as well as the morphological characteristics of the new genera are described and illustrated. This taxonomic study redefines the generic concept of Chaetomium and provides new insight into the phylogenetic relationships among different genera within Chaetomiaceae.
format Online
Article
Text
id pubmed-5226397
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher CBS Fungal Biodiversity Centre
record_format MEDLINE/PubMed
spelling pubmed-52263972017-01-12 Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments Wang, X.W. Houbraken, J. Groenewald, J.Z. Meijer, M. Andersen, B. Nielsen, K.F. Crous, P.W. Samson, R.A. Stud Mycol Research Paper During a study of indoor fungi, 145 isolates belonging to Chaetomiaceae were cultured from air, swab and dust samples from 19 countries. Based on the phylogenetic analyses of DNA-directed RNA polymerase II second largest subunit (rpb2), β-tubulin (tub2), ITS and 28S large subunit (LSU) nrDNA sequences, together with morphological comparisons with related genera and species, 30 indoor taxa are recognised, of which 22 represent known species, seven are described as new, and one remains to be identified to species level. In our collection, 69 % of the indoor isolates with six species cluster with members of the Chaetomium globosum species complex, representing Chaetomium sensu stricto. The other indoor species fall into nine lineages that are separated from each other with several known chaetomiaceous genera occurring among them. No generic names are available for five of those lineages, and the following new genera are introduced here: Amesia with three indoor species, Arcopilus with one indoor species, Collariella with four indoor species, Dichotomopilus with seven indoor species and Ovatospora with two indoor species. The generic concept of Botryotrichum is expanded to include Emilmuelleria and the chaetomium-like species B. muromum (= Ch. murorum) in which two indoor species are included. The generic concept of Subramaniula is expanded to include several chaetomium-like taxa as well as one indoor species. Humicola is recognised as a distinct genus including two indoor taxa. According to this study, Ch. globosum is the most abundant Chaetomiaceae indoor species (74/145), followed by Ch. cochliodes (17/145), Ch. elatum (6/145) and B. piluliferum (5/145). The morphological diversity of indoor Chaetomiaceae as well as the morphological characteristics of the new genera are described and illustrated. This taxonomic study redefines the generic concept of Chaetomium and provides new insight into the phylogenetic relationships among different genera within Chaetomiaceae. CBS Fungal Biodiversity Centre 2016-06 2016-12-08 /pmc/articles/PMC5226397/ /pubmed/28082757 http://dx.doi.org/10.1016/j.simyco.2016.11.005 Text en Copyright © 2016, CBS-KNAW Fungal Biodiversity Centre. Production and hosting by ELSEVIER B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Wang, X.W.
Houbraken, J.
Groenewald, J.Z.
Meijer, M.
Andersen, B.
Nielsen, K.F.
Crous, P.W.
Samson, R.A.
Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title_full Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title_fullStr Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title_full_unstemmed Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title_short Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments
title_sort diversity and taxonomy of chaetomium and chaetomium-like fungi from indoor environments
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5226397/
https://www.ncbi.nlm.nih.gov/pubmed/28082757
http://dx.doi.org/10.1016/j.simyco.2016.11.005
work_keys_str_mv AT wangxw diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT houbrakenj diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT groenewaldjz diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT meijerm diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT andersenb diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT nielsenkf diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT crouspw diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments
AT samsonra diversityandtaxonomyofchaetomiumandchaetomiumlikefungifromindoorenvironments