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Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area
Here, we report on the draft genome of a copper-resistant and acidophilic Desulfosporosinus sp. BG, isolated from the tailings of a molybdenum-tungsten mine in Transbaikal area. The draft genome has a size of 4.52 Mb and encodes transporters of heavy metals. The phylogenetic analysis based on concat...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5228091/ https://www.ncbi.nlm.nih.gov/pubmed/28116241 http://dx.doi.org/10.1016/j.gdata.2016.12.014 |
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author | Karnachuk, Olga V. Kadnikov, Vitalii V. Panova, Inna A. Mardanov, Andrey V. Beletsky, Alexey V. Danilova, Erzhena V. Avakyan, Marat R. Ravin, Nikolai V. |
author_facet | Karnachuk, Olga V. Kadnikov, Vitalii V. Panova, Inna A. Mardanov, Andrey V. Beletsky, Alexey V. Danilova, Erzhena V. Avakyan, Marat R. Ravin, Nikolai V. |
author_sort | Karnachuk, Olga V. |
collection | PubMed |
description | Here, we report on the draft genome of a copper-resistant and acidophilic Desulfosporosinus sp. BG, isolated from the tailings of a molybdenum-tungsten mine in Transbaikal area. The draft genome has a size of 4.52 Mb and encodes transporters of heavy metals. The phylogenetic analysis based on concatenated ribosomal proteins revealed that strain BG clusters together with the other acidophilic copper-resistant strains Desulfosporosinus sp. OT and Desulfosporosinus sp. I2. The K(+)-ATPase, Na(+)/H(+) antiporter and amino acid decarboxylases may participate in enabling growth at low pH. The draft genome sequence and annotation have been deposited at GenBank under the accession number NZ_MASS00000000. |
format | Online Article Text |
id | pubmed-5228091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-52280912017-01-23 Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area Karnachuk, Olga V. Kadnikov, Vitalii V. Panova, Inna A. Mardanov, Andrey V. Beletsky, Alexey V. Danilova, Erzhena V. Avakyan, Marat R. Ravin, Nikolai V. Genom Data Data in Brief Article Here, we report on the draft genome of a copper-resistant and acidophilic Desulfosporosinus sp. BG, isolated from the tailings of a molybdenum-tungsten mine in Transbaikal area. The draft genome has a size of 4.52 Mb and encodes transporters of heavy metals. The phylogenetic analysis based on concatenated ribosomal proteins revealed that strain BG clusters together with the other acidophilic copper-resistant strains Desulfosporosinus sp. OT and Desulfosporosinus sp. I2. The K(+)-ATPase, Na(+)/H(+) antiporter and amino acid decarboxylases may participate in enabling growth at low pH. The draft genome sequence and annotation have been deposited at GenBank under the accession number NZ_MASS00000000. Elsevier 2016-12-29 /pmc/articles/PMC5228091/ /pubmed/28116241 http://dx.doi.org/10.1016/j.gdata.2016.12.014 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data in Brief Article Karnachuk, Olga V. Kadnikov, Vitalii V. Panova, Inna A. Mardanov, Andrey V. Beletsky, Alexey V. Danilova, Erzhena V. Avakyan, Marat R. Ravin, Nikolai V. Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title_full | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title_fullStr | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title_full_unstemmed | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title_short | Genome sequence of the copper resistant and acid-tolerant Desulfosporosinus sp. BG isolated from the tailings of a molybdenum-tungsten mine in the Transbaikal area |
title_sort | genome sequence of the copper resistant and acid-tolerant desulfosporosinus sp. bg isolated from the tailings of a molybdenum-tungsten mine in the transbaikal area |
topic | Data in Brief Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5228091/ https://www.ncbi.nlm.nih.gov/pubmed/28116241 http://dx.doi.org/10.1016/j.gdata.2016.12.014 |
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