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A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals

Diffusion-weighted magnetic resonance imaging is a non-invasive imaging method that has been increasingly used in neuroscience imaging over the last decade. Partial volume effects (PVEs) exist in sampling signal for many physical and actual reasons, which lead to inaccurate fiber imaging. We overcom...

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Autores principales: Xu, Tiantian, Feng, Yuanjing, Wu, Ye, Zeng, Qingrun, Zhang, Jun, He, Jianzhong, Zhuge, Qichuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5233428/
https://www.ncbi.nlm.nih.gov/pubmed/28081561
http://dx.doi.org/10.1371/journal.pone.0168864
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author Xu, Tiantian
Feng, Yuanjing
Wu, Ye
Zeng, Qingrun
Zhang, Jun
He, Jianzhong
Zhuge, Qichuan
author_facet Xu, Tiantian
Feng, Yuanjing
Wu, Ye
Zeng, Qingrun
Zhang, Jun
He, Jianzhong
Zhuge, Qichuan
author_sort Xu, Tiantian
collection PubMed
description Diffusion-weighted magnetic resonance imaging is a non-invasive imaging method that has been increasingly used in neuroscience imaging over the last decade. Partial volume effects (PVEs) exist in sampling signal for many physical and actual reasons, which lead to inaccurate fiber imaging. We overcome the influence of PVEs by separating isotropic signal from diffusion-weighted signal, which can provide more accurate estimation of fiber orientations. In this work, we use a novel response function (RF) and the correspondent fiber orientation distribution function (fODF) to construct different signal models, in which case the fODF is represented using dictionary basis function. We then put forward a new index P(iso), which is a part of fODF to quantify white and gray matter. The classic Richardson-Lucy (RL) model is usually used in the field of digital image processing to solve the problem of spherical deconvolution caused by highly ill-posed least-squares algorithm. In this case, we propose an innovative model integrating RL model with spatial regularization to settle the suggested double-models, which improve noise resistance and accuracy of imaging. Experimental results of simulated and real data show that the proposal method, which we call iRL, can robustly reconstruct a more accurate fODF and the quantitative index P(iso) performs better than fractional anisotropy and general fractional anisotropy.
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spelling pubmed-52334282017-01-31 A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals Xu, Tiantian Feng, Yuanjing Wu, Ye Zeng, Qingrun Zhang, Jun He, Jianzhong Zhuge, Qichuan PLoS One Research Article Diffusion-weighted magnetic resonance imaging is a non-invasive imaging method that has been increasingly used in neuroscience imaging over the last decade. Partial volume effects (PVEs) exist in sampling signal for many physical and actual reasons, which lead to inaccurate fiber imaging. We overcome the influence of PVEs by separating isotropic signal from diffusion-weighted signal, which can provide more accurate estimation of fiber orientations. In this work, we use a novel response function (RF) and the correspondent fiber orientation distribution function (fODF) to construct different signal models, in which case the fODF is represented using dictionary basis function. We then put forward a new index P(iso), which is a part of fODF to quantify white and gray matter. The classic Richardson-Lucy (RL) model is usually used in the field of digital image processing to solve the problem of spherical deconvolution caused by highly ill-posed least-squares algorithm. In this case, we propose an innovative model integrating RL model with spatial regularization to settle the suggested double-models, which improve noise resistance and accuracy of imaging. Experimental results of simulated and real data show that the proposal method, which we call iRL, can robustly reconstruct a more accurate fODF and the quantitative index P(iso) performs better than fractional anisotropy and general fractional anisotropy. Public Library of Science 2017-01-12 /pmc/articles/PMC5233428/ /pubmed/28081561 http://dx.doi.org/10.1371/journal.pone.0168864 Text en © 2017 Xu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Xu, Tiantian
Feng, Yuanjing
Wu, Ye
Zeng, Qingrun
Zhang, Jun
He, Jianzhong
Zhuge, Qichuan
A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title_full A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title_fullStr A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title_full_unstemmed A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title_short A Novel Richardson-Lucy Model with Dictionary Basis and Spatial Regularization for Isolating Isotropic Signals
title_sort novel richardson-lucy model with dictionary basis and spatial regularization for isolating isotropic signals
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5233428/
https://www.ncbi.nlm.nih.gov/pubmed/28081561
http://dx.doi.org/10.1371/journal.pone.0168864
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